Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi11g0558 ATGAGTGCTGTTTTGTTCTCTGCTTCTCTCTCTTTGTTACAGTCTTCTCTGATTTCCTCAAATTCTCGCTCCCCAGAAATGGATGAGGATTTCGATATGCCCCCACCAGAGGGAATGGACGAGGATTTCGATCTCCCCGATGATGCCCCTACTATTAAGGTTGGAGAGGAAAAGGAGATCGGAAATCAGGGATTGAAGAAAAAGCTCGTTAAAGAAGGTGAAGGCTGGGAGACACCTGAAGTCGGCGATGAAGTTGAAGTTCATTACACGGGAACGTTGCTTGATGGGACAAAGTTTGATTCCAGCCGTGATAGAGAAACCCCCTTTAAGTTTACGCTCGGACAAGGGCAAGTAATTAAAGGGTGGGACCAGGGTATTAAGACCATGAAGAAAGGTGAAAATGCCGTTTTCACCATCCCTCCTGAGCTAGCATATGGTGAATCCGGTTCTCCTCCAACCATTCCTCCAAGTGCTACTCTTCAATTTGATGTTGAGCTTCTGTCTTGGACCAGTGTGAAGGACATATGCAAGGATGGTGGCATATTTAAGAAAATACTTGCTGAAGGAGAGAAATGGGAGAACCCCAAAGATCCTGATGAAGTTTTGGTTAAATATGAAGCTCGTCTTGAAGATGGAACACTTGTATCAAAATCTGATGGAGTGGAGTTTGCTGTGAAAGATGGTTACTTTTGTCCTGCATTTGCAAAGGCTGTGAAGACCATGAAGAAGGGAGAGAAAGTGCTTTTAACTGTGAAGCCACAATATGGTTTTGGTGAGAAGGGTAGAGCAGCCCAAGGTGATGAAGGTGCAGTTCCACCTAATGCATCCTTGCAGATAACTCTTGAATTGGTATCTTGGAAGACTGTTTCAGAAGTAACTGATGATAAGAAGGTCATTAAGAAAATCCTCAATGAAGGGGAAGGATATGAGCGTCCTAATGAGGGAGCTGTTGTGCAAGTGAAATTGGTTGGCAGACTACAAGATGGCACTGTCTTCTTGAGGAAGGGCTATGATGAAGAGCTTTTTGAATTCAAAACAGATGAAGAGCAAGTCATTGATGGACTAGATAGAGCAGTGTTGACTATGAAAAAGGGTGAAGTAGCATTGTTGACTATTGCACCTGAGTATGCCTTTGGTTCATCCGAGTCCAAGCAAGAATTGGCTGTTGTTCCTCCCAACTCTACTGTTTACTATGAAATCGAACTGGTTTCATTTGTGAAGGAGAAGGAGTCCTGGGATATGAACACACAGGAGAAGATTGAAGGTGCTGGTAAGAAGAAAGAAGAAGGAAATGCGTTGTTCAAGAGTGGGAAATATGCTAAAGCTTCTAAACGATATGAGAAGGCTGTCAAGTACATAGAGTATGACTCCTCCTTCAGTGAAGAGGAGAAGAAGCAGGCCAAGGCACTGAAGGTTGCTTGCAACCTGAACAATGCGGCTTGCATGTTGAAGTTGAAAAATTATAAAGAAGCTGAGAGGTTGTGTACTAAGGTTCTGGATCTTGAAAGCACAAATGTAAAGGCACTCTATAGAAGAGCACAGGCCTTAATTGAGTTGGCTGACTTGGATCTGGCGGAATTTGACATTAAGAAAGCTCTTGAGATAGACCCTAACAACAGGGATTTGAAGCTGGAGTACAAGAATTTGAAGGAGAAGATGAAGGAGTACAACAGAAAGGAGGCTAAATTTTATGGAAATATGTTTGCTAAGATGAGTAAGGTGGATTCAAATGACAATAATAAAGCAGCAAACAAGGATGCTGAACCTATGAGCGTTGACAGCAAAGCATGA 1791 0.4283 MSAVLFSASLSLLQSSLISSNSRSPEMDEDFDMPPPEGMDEDFDLPDDAPTIKVGEEKEIGNQGLKKKLVKEGEGWETPEVGDEVEVHYTGTLLDGTKFDSSRDRETPFKFTLGQGQVIKGWDQGIKTMKKGENAVFTIPPELAYGESGSPPTIPPSATLQFDVELLSWTSVKDICKDGGIFKKILAEGEKWENPKDPDEVLVKYEARLEDGTLVSKSDGVEFAVKDGYFCPAFAKAVKTMKKGEKVLLTVKPQYGFGEKGRAAQGDEGAVPPNASLQITLELVSWKTVSEVTDDKKVIKKILNEGEGYERPNEGAVVQVKLVGRLQDGTVFLRKGYDEELFEFKTDEEQVIDGLDRAVLTMKKGEVALLTIAPEYAFGSSESKQELAVVPPNSTVYYEIELVSFVKEKESWDMNTQEKIEGAGKKKEEGNALFKSGKYAKASKRYEKAVKYIEYDSSFSEEEKKQAKALKVACNLNNAACMLKLKNYKEAERLCTKVLDLESTNVKALYRRAQALIELADLDLAEFDIKKALEIDPNNRDLKLEYKNLKEKMKEYNRKEAKFYGNMFAKMSKVDSNDNNKAANKDAEPMSVDSKA 596
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi11g0558 596 Gene3D - 288 408 IPR046357 GO:0003755
Mibi11g0558 596 MobiDBLite consensus disorder prediction 575 596 - -
Mibi11g0558 596 FunFam Peptidylprolyl isomerase 55 173 - -
Mibi11g0558 596 PANTHER PEPTIDYLPROLYL ISOMERASE 57 170 - -
Mibi11g0558 596 ProSiteProfiles TPR repeat profile. 506 539 IPR019734 GO:0005515
Mibi11g0558 596 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 193 283 IPR001179 GO:0003755
Mibi11g0558 596 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 309 403 IPR001179 GO:0003755
Mibi11g0558 596 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 77 167 IPR001179 GO:0003755
Mibi11g0558 596 SUPERFAMILY FKBP-like 292 424 - -
Mibi11g0558 596 Coils Coil 539 566 - -
Mibi11g0558 596 Gene3D - 57 173 IPR046357 GO:0003755
Mibi11g0558 596 SMART tpr_5 506 539 IPR019734 GO:0005515
Mibi11g0558 596 SMART tpr_5 423 456 IPR019734 GO:0005515
Mibi11g0558 596 SMART tpr_5 472 505 IPR019734 GO:0005515
Mibi11g0558 596 FunFam Peptidylprolyl isomerase 411 566 - -
Mibi11g0558 596 SUPERFAMILY FKBP-like 59 174 - -
Mibi11g0558 596 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 198 287 IPR001179 GO:0003755
Mibi11g0558 596 FunFam Peptidylprolyl isomerase 288 408 - -
Mibi11g0558 596 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 82 170 IPR001179 GO:0003755
Mibi11g0558 596 SUPERFAMILY FKBP-like 174 290 - -
Mibi11g0558 596 FunFam Peptidylprolyl isomerase 174 287 - -
Mibi11g0558 596 Gene3D Tetratricopeptide repeat domain 409 566 IPR011990 GO:0005515
Mibi11g0558 596 SUPERFAMILY TPR-like 411 571 IPR011990 GO:0005515
Mibi11g0558 596 Gene3D - 174 287 IPR046357 GO:0003755
Mibi11g0558 596 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 315 406 IPR001179 GO:0003755
Mibi11g0558 596 MobiDBLite consensus disorder prediction 17 47 - -
Mibi11g0558 596 MobiDBLite consensus disorder prediction 31 45 - -
Mibi11g0558 596 Pfam Tetratricopeptide repeat 507 539 IPR013105 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi11g0558 Mibi-ChrMibi11 11399446 11405020 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi11g0558 27 571 Calmodulin-binding Proteins AT3G25230 81.239 0.0 889