Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi11g0557 ATGAGTTGTTGGTCATCAGCATCTGTTTTAATTAATCAGCTTATACCATTGTCTGCTGCAAGCACCAAATCTTATGTCAATATCAAAAGCTGCACCAGTTCTATTTGTAGTCCAAGCCAAGGAAGGTGCTGTCTCTCTGATTCCGAGAACCATCATAAAGTTGGGAGACTCAGGATTTCTAGGGTAGTTAAATCTAGACAAGGATTGACACATTTTCATGCACAACAAGGAACTTGGGAACAACCTGATGATGGCAGTGGTAGTGAGTATGATGATGAAGAAGAAGAGGAAACGGAAGATGAGAACTATGGCTTTGAGAGTGATTGGGAAGAGGAAGAGATGACGTCATCAGCGGTTAATGGCGTTATTTCTGTGGACACATATGGGGAGGATATTAAAAAAGAGGTTGAACGGCTTTTGGAGCCTGAAGAAAAAGCAGTCTTGCAGCAGAATGTGGCTCCAAACTTGAAAAAAATTTCAACTGAAAAATGGAGCCCACTGCACACTTTAGCGCTATCAATGCAGATAAAATATATGGATCAACTGCTTGAAAGTGGTGTGGATATTGATCTTAAGAACAAGGAAGGTCTCACTGCACTTCATATAGCTATCATTGGAAAGAAAGAAGCTGTAATAAGTCATCTTTTACGGAAAGGTGCAAGTCCTCATGTCAAGGATAAGGATGGTGCTACCCCACTTCATTATGCAGTCCAAGTTGGCGCCAAGCAAACTGTGAAGTTATTGATCAAATATAAGGTCGATGTCAACGTTGGAGATAATGAAGGTTGGACCCCATTGCATGTTGCTATTCAAAGCAGAAATAGAGACATTGCAAAAATTTTGTTAGTCAATGGTGCGGATAAGACAAGAAGAAATAAGGATGGGAAAACAGCATTGGATCTAAGTTTATGTTATGGGAAGGACTTCAAATCTTATGACCTTGGCAAATTATTGAAGGTAGTTCCAGCTGACACAGATTTTTGA 984 0.4004 MSCWSSASVLINQLIPLSAASTKSYVNIKSCTSSICSPSQGRCCLSDSENHHKVGRLRISRVVKSRQGLTHFHAQQGTWEQPDDGSGSEYDDEEEEETEDENYGFESDWEEEEMTSSAVNGVISVDTYGEDIKKEVERLLEPEEKAVLQQNVAPNLKKISTEKWSPLHTLALSMQIKYMDQLLESGVDIDLKNKEGLTALHIAIIGKKEAVISHLLRKGASPHVKDKDGATPLHYAVQVGAKQTVKLLIKYKVDVNVGDNEGWTPLHVAIQSRNRDIAKILLVNGADKTRRNKDGKTALDLSLCYGKDFKSYDLGKLLKVVPADTDF 327
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi11g0557 327 Pfam Ankyrin repeats (3 copies) 211 292 IPR002110 GO:0005515
Mibi11g0557 327 Gene3D - 230 308 IPR036770 -
Mibi11g0557 327 ProSiteProfiles Ankyrin repeat profile. 195 227 IPR002110 GO:0005515
Mibi11g0557 327 Gene3D - 128 229 IPR036770 -
Mibi11g0557 327 ProSiteProfiles Ankyrin repeat region circular profile. 195 227 - -
Mibi11g0557 327 ProSiteProfiles Ankyrin repeat profile. 162 194 IPR002110 GO:0005515
Mibi11g0557 327 MobiDBLite consensus disorder prediction 85 111 - -
Mibi11g0557 327 ProSiteProfiles Ankyrin repeat profile. 228 260 IPR002110 GO:0005515
Mibi11g0557 327 ProSiteProfiles Ankyrin repeat region circular profile. 228 260 - -
Mibi11g0557 327 SMART ANK_2a 195 224 IPR002110 GO:0005515
Mibi11g0557 327 SMART ANK_2a 228 257 IPR002110 GO:0005515
Mibi11g0557 327 SMART ANK_2a 261 290 IPR002110 GO:0005515
Mibi11g0557 327 SMART ANK_2a 162 191 IPR002110 GO:0005515
Mibi11g0557 327 ProSiteProfiles Ankyrin repeat region circular profile. 261 287 - -
Mibi11g0557 327 PANTHER ANKYRIN REPEAT FAMILY PROTEIN 67 319 - -
Mibi11g0557 327 ProSiteProfiles Ankyrin repeat profile. 261 293 IPR002110 GO:0005515
Mibi11g0557 327 SUPERFAMILY Ankyrin repeat 155 306 IPR036770 -
Mibi11g0557 327 MobiDBLite consensus disorder prediction 72 111 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi11g0557 179 287 Ion Channels AT2G25600 30.714 3.69e-09 56.2