Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi11g0504 ATGCGTGATTTGGATGCAGTAATATCATTACTCGAGATGAGTGGTTCTACTGGGGAGCGTGCTCTCAGAAGTTACCGACGAAGGAAGGCTGTTTTGGATTTGGATCTTAATAGAGCTCCACCTGGTGAGAACCGGGAGCAAGAGGGACCTTCAATTCCGCTGGAACCTCAGTCAGTTCATGCTGTCCAGCTACCACAAGTTGTACAGCCTATTGATGTGGAGGCCATTGAAGATGATGTTATTGAATGTACAGCAAGTGCTTTTGCTGAAGCTAAAAACAATTCAAGAAGGAATCGTGGGAGGACAGTAGTTGATGTGGATTTAGATTCTCAGGGTTGGATAACTGCAAACACTGCTAACAATTGCAGAAGAGATTCTTCAAGCCAAACACTTCTTAATTCTGATCTTTGTATAAACTTGGAAGGCAGTGGCAGTTCTGAGTGGGGGAACGATAAAAAGGTACCTAAACCTCCAATGGAGCCTGTCTTTAGCTGTCCAATATGTATGGGCCCATTTACAGAAGAAGTTTCTACAAGGTGTGGTCACATATTCTGTAAGAGTTGCATAAAGGCTGCTATAACTGCACAGGGTAAATGCCCTACTTGTAGGAAAAAGGTTACCGCAAAGGAGCTTATCAGGGTGTTTCTACCATCAACTAGTTGA 663 0.4359 MRDLDAVISLLEMSGSTGERALRSYRRRKAVLDLDLNRAPPGENREQEGPSIPLEPQSVHAVQLPQVVQPIDVEAIEDDVIECTASAFAEAKNNSRRNRGRTVVDVDLDSQGWITANTANNCRRDSSSQTLLNSDLCINLEGSGSSEWGNDKKVPKPPMEPVFSCPICMGPFTEEVSTRCGHIFCKSCIKAAITAQGKCPTCRKKVTAKELIRVFLPSTS 220
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi11g0504 220 SMART ring_2 165 202 IPR001841 -
Mibi11g0504 220 ProSiteProfiles Zinc finger RING-type profile. 165 203 IPR001841 -
Mibi11g0504 220 PANTHER ELFLESS, ISOFORM B 18 220 - -
Mibi11g0504 220 Pfam Zinc finger, C3HC4 type (RING finger) 165 202 - -
Mibi11g0504 220 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 135 218 IPR013083 -
Mibi11g0504 220 ProSitePatterns Zinc finger RING-type signature. 180 189 IPR017907 -
Mibi11g0504 220 SUPERFAMILY RING/U-box 158 215 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi11g0504 Mibi-ChrMibi11 9727920 9730176 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi11g0504 20 219 C3H Transcription Factor Family AT5G48655 52.970 1.84e-52 166