Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi11g0446 ATGGCCGACGGCGATGAACTGTTGAAGCATAGGGCTGTTTCTTTTGATAGCATTGTTGTTGAAAATGTCATCGCAGAGTCTGCTCCAGATGAGACTGATAACAATATTCAGAGCGAGGAACATGCCAATGTTGCTGATCCAAAGCAGGATCAGTCGCTGCCTTTCTACATGCTTGATGCCCATGAGGAATTCAATGGACCTAATATTGGTACCTTGCATCTGTTCGGGAAGGTCAAAACAGGTGATTCGTATCAGAGTTGCTGTGTTGTTGTAGAGAACATGCAGAGGTGTGTCTATGCAATTCCTAGTCGTCCTTTACATCTCACTGATGAGATGATGAAACTTGAGAAGGATGTTGAAGAGTCCCGGATTTCTCGTACAGACTTTCATAGAAGGCTGCAAGATATGGTGTCTGGTTTAGAGAATGAGATAGCAAACCAGCTGTCCGCTCTGAAGATTTCAACCTTTAGCATGAAGCCTGTTAAGGATCCACCTCTTCCTGTAGATATGAAAGGAGAGAGTTTCTGCGCTGTTCTAGGGACTCATTGCAGGTCAATATTTGATCATTACGCTGCACTTGCAGGGTCAAGTGAAAGGGCTTTACTAAACCGCCTGATGATAGAATTACACAAGTTGGATAGTGATGTTCTTGTTGGACATAACATTTCTGGATTTGACCTGGATGTTCTTCTTCACAGATGTGAGGCTTCTAAAGTGTCAGGCATCATGTTGTCCAAAACGGGTCGCCTTAAACGATATTCAATGCCTAAACTTACCAGAGTTAGCTTTGTTTTTGGTTCTGGAGCTAATCCTGCGATCTTGTCTTGCATTGCTGGTCGGCTCCTTTAAACTCAGCTGAATAAAGTTCGGAAGGAAGTTGCTCCACATGATGTTCCAAAAATGTTCCAATCCGCAGAATGCCTCATGGAACTTATTGAGTATGGCGAGACAGATGCATGGTTGTCTATGGAACTCATGTTTCATTTGAGTGTTCTCCCCCTCACGCGTCAGCTGACTAATATTAGTGGTAATTTGTGGGGGAAAACACTTCAGATGGATCTTTTCCTTGTTTGCCATCTAGTAAAACAACTGGAGTTTTGCCAGAGGAGGAGAATGGTGAAGTCATGGATGAAAAACGCTTCTGGTCTTAAAGTTCAGCAACTGGACATTCAGCAACAAGCACTCAAGCTTACTGCAAACAGGTTATTGAACGTAAAGGTGCAAGAAGAGATGAGGAGTGGACAAGTGCCGTTAGAGAAATATATCATCACTAAGACATTGACTAAACCTCCTGAAGCCTATCCAGATGCCAAAAATCAACCACATGTGGCACAAAGGTTGAAGCAAAAGGGCTACTCTACTGGCTGCTCTGTTAGTGATGCAATCCCCTACATTATTTGCTATGAGCAGCAGGGCACTAATTCAAGCAGCGGAACAAGTATTGCTCAACGTGCTAGACATCCTGTGGAACTGAAACAAGAACAAGGCAAATGGATGATTGACATTGATTATTACTTGTCACAACAGCTTCATCCTGTTGTATCACGTCTCTGTGCATCAATTCAGGGCACAAGTCCAGAAAGGTTGGCTGATTGTTTAGGGCTTGATGCATCAAAATTTCAACACAAGTCAAGTGAAGCCTACAATGGTGATCCTTCAAATTCACTCTTGTTTGCTGCTGATGACAAAGAGAGGTATCAAGGATGCCAGCCGTTGGTTTTGTCATGTCCTAGCTGCTCTGGTACTTTTGACTGTCCTTCCATCTTTAAGTCTGTTTGTGAAAGTGAAAATCCAACAAGCTCGAGCAAGGAGGAATCAAGCTATAACTTCTGGCGTAAGCTGCGCTGTCCTAAGTGCCCGGAAGATGATGGTGTTGGTAGAATTTCTCCTGCAATGATTGCCAGTCAGGTCAAAAGGCAAGCAGATAAGTTTATTTCAATGTACTACATGGGCTTGTTAATGTGTGACAATGAAACTTGTAAGTATTCTACACGAAGTATCAACCTTCGCCTGGTTGGTGACTCTGAAAGAGGAACTGTTTGTCCAAATTACCCTCGCTGCAATGGGAGTCTTCTACGACAGATGGAGGTCAAATCTAGGATACCAATTGAGAAAGAAATGTCGAAAATTAGGCCTATGATTGATCTGGCAGCATCTACGGCACTGAAGATTCGGGATCGGTGTGCCTTTGGGTGGGTAAAGATGCAGGATTTGTTCGTCACCGTATGA 2229 0.4343 MADGDELLKHRAVSFDSIVVENVIAESAPDETDNNIQSEEHANVADPKQDQSLPFYMLDAHEEFNGPNIGTLHLFGKVKTGDSYQSCCVVVENMQRCVYAIPSRPLHLTDEMMKLEKDVEESRISRTDFHRRLQDMVSGLENEIANQLSALKISTFSMKPVKDPPLPVDMKGESFCAVLGTHCRSIFDHYAALAGSSERALLNRLMIELHKLDSDVLVGHNISGFDLDVLLHRCEASKVSGIMLSKTGRLKRYSMPKLTRVSFVFGSGANPAILSCIAGRLLXTQLNKVRKEVAPHDVPKMFQSAECLMELIEYGETDAWLSMELMFHLSVLPLTRQLTNISGNLWGKTLQMDLFLVCHLVKQLEFCQRRRMVKSWMKNASGLKVQQLDIQQQALKLTANRLLNVKVQEEMRSGQVPLEKYIITKTLTKPPEAYPDAKNQPHVAQRLKQKGYSTGCSVSDAIPYIICYEQQGTNSSSGTSIAQRARHPVELKQEQGKWMIDIDYYLSQQLHPVVSRLCASIQGTSPERLADCLGLDASKFQHKSSEAYNGDPSNSLLFAADDKERYQGCQPLVLSCPSCSGTFDCPSIFKSVCESENPTSSSKEESSYNFWRKLRCPKCPEDDGVGRISPAMIASQVKRQADKFISMYYMGLLMCDNETCKYSTRSINLRLVGDSERGTVCPNYPRCNGSLLRQMEVKSRIPIEKEMSKIRPMIDLAASTALKIRDRCAFGWVKMQDLFVTV 742
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi11g0446 742 Pfam DNA Polymerase alpha zinc finger 560 696 IPR015088 GO:0003887|GO:0006260
Mibi11g0446 742 Pfam DNA polymerase family B, exonuclease domain 196 263 IPR006133 -
Mibi11g0446 742 Gene3D DNA Polymerase alpha, zinc finger 559 699 IPR038256 -
Mibi11g0446 742 PANTHER DNA POLYMERASE ALPHA CATALYTIC SUBUNIT 196 282 - -
Mibi11g0446 742 Gene3D - 372 549 IPR042087 -
Mibi11g0446 742 Pfam DNA polymerase family B 406 520 IPR006134 GO:0000166|GO:0003677
Mibi11g0446 742 MobiDBLite consensus disorder prediction 29 48 - -
Mibi11g0446 742 SUPERFAMILY Ribonuclease H-like 49 349 IPR012337 -
Mibi11g0446 742 SUPERFAMILY DNA/RNA polymerases 406 535 IPR043502 -
Mibi11g0446 742 Gene3D - 143 282 IPR036397 GO:0003676
Mibi11g0446 742 Gene3D - 283 367 IPR036397 GO:0003676
Mibi11g0446 742 Gene3D - 48 127 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi11g0446 Mibi-ChrMibi11 7541494 7551820 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi11g0446 405 740 Core DNA Replication Machinery Family AT5G67100 56.438 3.20e-139 444