Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi11g0423 ATGGGAAATTGTGGTACCAGAGAGGAATCAGCTGTTGTCTCCAATGCACAAGTTCAACAGCTTCATATGTCGTCTTTGACTGCTAAAAGTACGGCTGGTGAGAAGAAGCATAATCGGTCTGTGTCAGATCTGAGTGACATTTCTACACCAAGGCATAACTTTGAGGATGCCAGGAAGAATACGCTTCTGTATACTCATGTTATTGCTTTTACATTGTATGAGCTTGAGACTATTACTAAAAGCTTTCGCTCTGATTATATCCTTGGAGAAGGGGGTTTTGGTACTGTCTATAAAGGTTACATTGATGAGAATGTGAGAGTTGGACTCAAATCCCTTCCTGTTGCTGTCAAGGTTCTAAATAAGGAGGGTCTTCAGGGACATCGCGAGTGGCTTACAGAAGTCAATTTTCTGGGACAGCTCAGGCATCCTAATTTGGTTAAGTTGATTGGTTACTGCTGCGAGGACGATCACAGGCTACTTGTATATGAGTTCATGTTTCGAGGAAGTTTAGAGAATCATCTATTCCGAAAGGCAACTGTTCCTTTATCGTGGGCAACAAGAATGATGATTGCCCTTGGAGCTGCCAAGGGGCTTGCTTTTCTTCATAATGCTGAAAGGCCAGTAATCTATCGAGACTTCAAAACTTCTAATATATTATTGGACTCTGATTATACAGCCAAGCTTTCTGATTTTGGATTAGCAAAAGCTGGACCACAAGGTGATGAAACCCATGTGTCCACCAGGGTTATGGGTACTTATGGATATGCTGCCCCTGAATATGTAATGACTGGCCACCTGACTGCAAGAAGTGATGTGTATAGCTTTGGAGTTGTTCTTTTGGAACTTCTAACAGGAAGAAAATCTGTTGACAAAACAAGACCAGGTAAGGAACAGAGCTTGGTGGATTGGGCTAGACCAAAACTCAATGATAAGAGAAAGCTCCTGCAGATAATTGATCCTAGATTGGAAAGCCAATACTCAGTGAGGGCAGCACAGAAAGCATGTAGCTTGGCTTACTACTGTTTGAGTCAAAATCCCAAAGCGAGGCCGTTAATGAGTGATGTAGTTGAGACATTGGAACCTTTACAAAGTTGTAGTGATGGTGCTGGTGAAGTCTCATCATTGGGATCAAGTAATGGAGGCGGTGGTCCCTTTGCCATGAGTGGAATCTCCGATTACCGGATGCGCCAGAGGTTTTCAAACAATGTTGGTCCAGGCGCTACTTGTCGGTCTCCAAATCCAAACTGCTCACCAGGCGCCGCTGCAGCGTGCCGGGTCAGATGA 1284 0.44 MGNCGTREESAVVSNAQVQQLHMSSLTAKSTAGEKKHNRSVSDLSDISTPRHNFEDARKNTLLYTHVIAFTLYELETITKSFRSDYILGEGGFGTVYKGYIDENVRVGLKSLPVAVKVLNKEGLQGHREWLTEVNFLGQLRHPNLVKLIGYCCEDDHRLLVYEFMFRGSLENHLFRKATVPLSWATRMMIALGAAKGLAFLHNAERPVIYRDFKTSNILLDSDYTAKLSDFGLAKAGPQGDETHVSTRVMGTYGYAAPEYVMTGHLTARSDVYSFGVVLLELLTGRKSVDKTRPGKEQSLVDWARPKLNDKRKLLQIIDPRLESQYSVRAAQKACSLAYYCLSQNPKARPLMSDVVETLEPLQSCSDGAGEVSSLGSSNGGGGPFAMSGISDYRMRQRFSNNVGPGATCRSPNPNCSPGAAAACRVR 427
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi11g0423 427 ProSitePatterns Serine/Threonine protein kinases active-site signature. 208 220 IPR008271 GO:0004672|GO:0006468
Mibi11g0423 427 SUPERFAMILY Protein kinase-like (PK-like) 59 360 IPR011009 -
Mibi11g0423 427 Gene3D Phosphorylase Kinase; domain 1 42 164 - -
Mibi11g0423 427 FunFam Serine/threonine-protein kinase BIK1 48 164 - -
Mibi11g0423 427 Pfam Protein tyrosine and serine/threonine kinase 87 359 IPR001245 GO:0004672|GO:0006468
Mibi11g0423 427 FunFam Probable serine/threonine-protein kinase PBL8 165 377 - -
Mibi11g0423 427 MobiDBLite consensus disorder prediction 27 50 - -
Mibi11g0423 427 ProSitePatterns Protein kinases ATP-binding region signature. 88 117 IPR017441 GO:0005524
Mibi11g0423 427 Gene3D Transferase(Phosphotransferase) domain 1 165 372 - -
Mibi11g0423 427 ProSiteProfiles Protein kinase domain profile. 82 363 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi11g0423 427 CDD STKc_IRAK 88 362 - -
Mibi11g0423 427 PANTHER OS01G0588500 PROTEIN-RELATED 42 363 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi11g0423 Mibi-ChrMibi11 7278187 7281583 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi11g0423 70 369 Glycoside Hydrolase AT3G07070 54.125 2.00e-109 327
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Mibi11g0423 PK_Tyr_Ser-Thr 4e-48 CL0016