Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi11g0399 ATGGATGATGCTGGGCATCGTGAAAATGGAAGGCACAAAGCCGATCAATATAAATCAGCTCAGGGGCAGTGGTTGATGCAACATCAACCCTCAATGAAGCAAATTATGGCAATCATGGCTGAGAGAGATGCAGCTATTCAAGAGAGAAATCTAGCCCTTTCTGAAAAAAAGGCAGCCCTTGCTGAGCGTGATATGGCATTCTTGCAACGAGACACTGCTATCAACGAACGGAATACTGCCATTATGGAAAGAGATAATGCTATTGCTACCCTTCAATATCGAGAGAACTCCTTAGCCAGTGGTAGCATGTCTTCTTGCCCTCCAGGATGCCAAATTGCTCGAGGTGTCAAGCATGTGCATCATCCTCAGCAGCAAGTACACCACTTACCTCATATGGGGGATACTTCTTACGGCACACGGGAAATGCATGCTGGTGATGACCTTCCAACAGCATCCATGCCTAATGAAGCCGGGAAATCACGTCGGGCCAAGCGGCCAAAGGATGGTAAGTCAATTTCACCTAATAAGAAGGCACCAAGAGCAAAAAAGCTCAAGAGGGAGGGTGAAGACTTAAATAAGATGATGTTTGGAAAGGCACATGAGTGGAAGAGTGGTCAGGAAATGGTTAATGGAGGTGATGATCTTAACAAGCAGTTGGGGTCTTCGAAGGCAGATTGGAAAGGTCAAGACTTGGGGTTGAACCAGGTAGTATATGATGAGTCAACAATGCCAGCACCTGTATGCTCTTGTACTGGTGTTCTGAGACAGTGCTACAAATGGGGGAACGGGGGCTGGCAGTCTGCTTGTTGCACAACAACTCTATCAATGTATCCACTTCCAGCAGTTCCCAATAAGAGGCATGCTAGGGTTGGTGGACGAAAGATGAGTGGAGGCGCGTTCAATAAGCTTCTTAGCCGGCTTGCAGCAGAGGGCCATGATCTGTCAAACCCAGTTGACTTGAAGGACCACTGGGCCAAACATGGCACAAACCGCTATATAACAATCAAGTAG 1011 0.4728 MDDAGHRENGRHKADQYKSAQGQWLMQHQPSMKQIMAIMAERDAAIQERNLALSEKKAALAERDMAFLQRDTAINERNTAIMERDNAIATLQYRENSLASGSMSSCPPGCQIARGVKHVHHPQQQVHHLPHMGDTSYGTREMHAGDDLPTASMPNEAGKSRRAKRPKDGKSISPNKKAPRAKKLKREGEDLNKMMFGKAHEWKSGQEMVNGGDDLNKQLGSSKADWKGQDLGLNQVVYDESTMPAPVCSCTGVLRQCYKWGNGGWQSACCTTTLSMYPLPAVPNKRHARVGGRKMSGGAFNKLLSRLAAEGHDLSNPVDLKDHWAKHGTNRYITIK 336
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi11g0399 336 MobiDBLite consensus disorder prediction 134 188 - -
Mibi11g0399 336 MobiDBLite consensus disorder prediction 158 175 - -
Mibi11g0399 336 Pfam GAGA binding protein-like family 1 336 IPR010409 -
Mibi11g0399 336 MobiDBLite consensus disorder prediction 1 21 - -
Mibi11g0399 336 PANTHER - 1 336 IPR010409 -
Mibi11g0399 336 Coils Coil 51 71 - -
Mibi11g0399 336 MobiDBLite consensus disorder prediction 1 15 - -
Mibi11g0399 336 SMART GAGA_bind_2 1 336 IPR010409 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi11g0399 Mibi-ChrMibi11 6598916 6600069 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi11g0399 65 336 BBR or BPC Transcription factor family AT5G42520 63.699 3.25e-119 343
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF BBR-BPC Mibi11g0399 GAGA_bind 2.1e-106 No_clan