Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi11g0396 ATGCGGGGTACGAAATTATATGGATTTGGCCTGGCTTTTTCGTTTTTCTGTTTCATTCTTGCAGCAGCAGCACAAAAGACACATCCTTCGGAAGTGAATGCATTGGTCCAAATCAAGAAAAGTTTGATTGATCCCAAGAACCATCTGATGAACTGGAATAAGGGCGACCCGTGTACATCAAACTGGACTGGTGTTTGGTGTTTTGGTAGGGTTGAGACTGATGGATACTTCCACGTCCATGAGCTTTACTTAATGACTTCAAATCTCTCTGGAAGTCTAGCACCTCAGCTTGGTCAGTTATCTCAGCTTCAGATCATGAACTTCATGTGGAATAATCTGACAGGAACCATACCAAAGGAGATAGGAAATATCAAATCATTGAAACTCCTACTCCTGAATGGCAACAATTTATCTGGTTCTATGCCTGATGAACTTGGCAATCTCTCAAACTTGAATAGGCTCCAAGTTGACCAAAACCAATTGTCAGGTCCAATACCACTATCGTTTGCCAACTTGGTCAATGTTAAGCATCTCCACTTGAACAATAACTCATTTACTGGTCAAATTCCACGGGAACTTGCAAAGTTACCCAATCTACAGCATTTGCTTGTGGACAATAACAACTTTTCCGGCCATCTTCCACCAGAATTCTCCACATCACCGGCATTGCGCATACTCCAAGTTGATAACAATAACTTCAGTGGAGCAGAAATTCCTTCTACCTATGCAAACTTTTCCAAGCTAGTGAAACTAAGTCTTAGAAACTGCAGCTTGCAAGGAGCTGTTCCTGATCTGAGTTCGATAAAAGAGCTAAGCTATTTGGATCTTAGCTGGAATCATCTTACTGGGCCCATACCAGCAAAGAAACTCTCGGATAATATGACAACTATTGACCTATCAAATAATAACATCAATGGATCTATTGCTGGAAGCATCAAATTACTTCCTTTACTTCAAAGATTGTCACTAGCGAACAATTCCCTTTCTGGATCCATCCCTGCAAGTTTATGGCAAAACATGTCCTTCAGTAGGAGCTCTAAGCTCACAATTGATCTCCGCAATAATTCATTTTCAGACATTTCAGGAAGTTCAAGGGTACCAGAAAATGTCACCTTGAGGCTTGCTGGCAATCCTATCTGCAAGAATTTCAACATTCGAAATGTTGATCAATATTGTGCCTCCAAAGTGGTTAAATCTGACAAACCTGTGAATTCAACAACTGCCTGTCCTGCTCAAGCTTGTCCAAAGGATGGTTTCTATGAATATGTCCCAGATTATCCTGTTCCCTGCTATTGTGCGGCACCTCTAAGAATTGGATATCGTCTGAAAAGCCCAAGTTTCTCTTACTTTTCTCCTTATAGAACTTATTTTGTGTTATATCTGGCTCAGTCTCTACATTTGGACCTATATCAAATATGGATAGATTCAGCTGCTTGGGAAGCAGGACCTCGTCTTAGGATGTATTTGAAACTCTATCCTAATTACAATGATTCCCACTCCAATAAGTTCAATACAAGTGAGGTCCGGCGTATTCAGGGCATGTTTGGATCATGGAATTTTCCTCGCACTGATTTTTTTGGACCATATGAACTCCTGAACTTCACCCTCCTCGGACCTTATGAAGAATTAACTTTTGGGACAAATAATGGGAAGATCAGTACAACCGTGTTGGTAGTTGCCATAATAGCAGCTATTGCTTGTGCTGGCACGATCTCTGCAATTGTCACTCTTGTGATGGCCAAAAGACATATAAAATACCGTCCCAAGTTATCCAGGAATCATATATCCTCTAATGTTTCCATCAAAATTGATGGTGTGAAAGCATTCACTTTCAAAGAACTGGCTCATGCAACTGACAATTTCAGCAGTTCAGCTGTTGTTGGCCAAGGAGGTTATGGGAAGGTTTATAAAGGCATTCTGTTTGATAAAACAGTTGTGGCTGTGAAGCGAGTAGACGAAGGTTCTTTACAAGGCCAAAGAGAATTTTTGACTGAGATTGAACTTCTATCAAGGTTACATCATCGAAATCTAGTTTCATTGGTGGGATACTGTGATGAAGAAGGAGAGCAGATTCTGGTTTACGAATTCATGCCTAATGGTACCTTGCGGGAGTGGATTTCTGGTAAACGGAAGGGAAACCTAAACTTTGATATGAGGATGAGGATTGCAATGGGGGCCTCCAAAGGCATATTGTATCTCCATACTGAGGCTAACCCTCCCATATTCCACCGAGATATTAAAGCTAGCAACATACTTCTGGACCGCACGCTGGTTGCTAAAGTGGCTGACTTTGGACTCTCACGTCTTGCACCAAATACAGATGACGAAGGGAACATGCCTAGATATGTGTCAACAGTTGTGAGGGGAACACCAGGTTACTTAGATCCTGAGTACTTTTTGACTCATAAGTTAACGGACAAAAGTGACGTTTATAGCTTGGGAATTGTGTTTCTGGAGCTTCTGACAGGCATGCATCCAATATCACATGGGAAAAACATTGTTCGTGAGGTTAACGAGGCGCGTCAGTGTGGCATGATAGCTTCTATTATAGATACCAAAATGGGTTCTTATCCATCAGATTGTGTGGACAAGTTTCTAAATCTTTCCCTCGGTTGTTGCCATGAGAATCCAGAGGAGAGACCGTGCATGGTAGATGTGGTGAGGGAGTTGGAGATTATTCTCTCAATGTTGCCAGATTCTGAAACTGCTTTCCCAGACAGTGGATATGACTTTTCTGTAAAAATGGCTTCGTCGTCGTCATCAAAGTCCTACATGGCACGGGACGGCCAACACATGTCCTCTCCTATGTTGTCAGGAAGCAACCTCATCAGTGATGTTATTCCCACCATCGTTCCTCGTTAA 2862 0.4186 MRGTKLYGFGLAFSFFCFILAAAAQKTHPSEVNALVQIKKSLIDPKNHLMNWNKGDPCTSNWTGVWCFGRVETDGYFHVHELYLMTSNLSGSLAPQLGQLSQLQIMNFMWNNLTGTIPKEIGNIKSLKLLLLNGNNLSGSMPDELGNLSNLNRLQVDQNQLSGPIPLSFANLVNVKHLHLNNNSFTGQIPRELAKLPNLQHLLVDNNNFSGHLPPEFSTSPALRILQVDNNNFSGAEIPSTYANFSKLVKLSLRNCSLQGAVPDLSSIKELSYLDLSWNHLTGPIPAKKLSDNMTTIDLSNNNINGSIAGSIKLLPLLQRLSLANNSLSGSIPASLWQNMSFSRSSKLTIDLRNNSFSDISGSSRVPENVTLRLAGNPICKNFNIRNVDQYCASKVVKSDKPVNSTTACPAQACPKDGFYEYVPDYPVPCYCAAPLRIGYRLKSPSFSYFSPYRTYFVLYLAQSLHLDLYQIWIDSAAWEAGPRLRMYLKLYPNYNDSHSNKFNTSEVRRIQGMFGSWNFPRTDFFGPYELLNFTLLGPYEELTFGTNNGKISTTVLVVAIIAAIACAGTISAIVTLVMAKRHIKYRPKLSRNHISSNVSIKIDGVKAFTFKELAHATDNFSSSAVVGQGGYGKVYKGILFDKTVVAVKRVDEGSLQGQREFLTEIELLSRLHHRNLVSLVGYCDEEGEQILVYEFMPNGTLREWISGKRKGNLNFDMRMRIAMGASKGILYLHTEANPPIFHRDIKASNILLDRTLVAKVADFGLSRLAPNTDDEGNMPRYVSTVVRGTPGYLDPEYFLTHKLTDKSDVYSLGIVFLELLTGMHPISHGKNIVREVNEARQCGMIASIIDTKMGSYPSDCVDKFLNLSLGCCHENPEERPCMVDVVRELEIILSMLPDSETAFPDSGYDFSVKMASSSSSKSYMARDGQHMSSPMLSGSNLISDVIPTIVPR 953
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi11g0396 953 Pfam Protein kinase domain 623 887 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi11g0396 953 SUPERFAMILY L domain-like 46 387 - -
Mibi11g0396 953 Gene3D Transferase(Phosphotransferase) domain 1 697 903 - -
Mibi11g0396 953 ProSitePatterns Serine/Threonine protein kinases active-site signature. 741 753 IPR008271 GO:0004672|GO:0006468
Mibi11g0396 953 Gene3D Ribonuclease Inhibitor 190 290 IPR032675 -
Mibi11g0396 953 Pfam Leucine rich repeat 149 209 IPR001611 GO:0005515
Mibi11g0396 953 CDD STKc_IRAK 627 893 - -
Mibi11g0396 953 ProSiteProfiles Protein kinase domain profile. 621 894 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi11g0396 953 SUPERFAMILY Protein kinase-like (PK-like) 606 926 IPR011009 -
Mibi11g0396 953 FunFam LRR receptor-like serine/threonine-protein kinase HSL2 697 906 - -
Mibi11g0396 953 ProSitePatterns Protein kinases ATP-binding region signature. 627 649 IPR017441 GO:0005524
Mibi11g0396 953 Gene3D Ribonuclease Inhibitor 28 189 IPR032675 -
Mibi11g0396 953 Pfam Leucine rich repeat N-terminal domain 29 67 IPR013210 -
Mibi11g0396 953 Gene3D Phosphorylase Kinase; domain 1 583 696 - -
Mibi11g0396 953 FunFam Leucine-rich repeat protein kinase family protein 585 696 - -
Mibi11g0396 953 SMART serkin_6 621 893 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi11g0396 953 SMART LRR_typ_2 124 147 IPR003591 -
Mibi11g0396 953 SMART LRR_typ_2 196 220 IPR003591 -
Mibi11g0396 953 SMART LRR_typ_2 148 171 IPR003591 -
Mibi11g0396 953 SMART LRR_typ_2 172 195 IPR003591 -
Mibi11g0396 953 SMART LRR_typ_2 315 339 IPR003591 -
Mibi11g0396 953 FunFam Probable LRR receptor-like serine/threonine-protein kinase At1g06840 29 190 - -
Mibi11g0396 953 Gene3D Ribonuclease Inhibitor 291 415 IPR032675 -
Mibi11g0396 953 PANTHER RECEPTOR-LIKE PROTEIN 55 38 895 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi11g0396 Mibi-ChrMibi11 6546762 6557409 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi11g0396 5 902 Receptor kinase-like Gene Family AT5G01950 60.976 0.0 1110
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VIII-1 Mibi11g0396 Pkinase 1.5e-48 CL0016