Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi11g0395 ATGCGGCGTACGAAATTATATGGATTCGGCCTGGGTTTTTCGTTTTTCTGTTTCATTCTTGCAGCAGCAGCACAAAAGACACATCCTTCGGAAGTGAATGCATTGGTCCAAATCAAGAAAAGTTTGATTGATCCCAAGAACCATCTGAGGAACTGGAATAAGGGCGACCCATGTACATCAAACTGGACTGGTGTTTGGTGTTTTGGTAGCGTTGGGACTGATGGATACTTCCACGTCCATGAGCTTTACTTAATGACTTCAAATCTCTCAGGAAGTCTAGCATCTCAGCTTGGTCAGTTATCTCAGCTTCAGATCATGAACTTCATGTGGAATAATCTGACAGGAACCATACCAAAGGAGATAGGAAATATCAAATCATTGAAACTCCTACTCCTGAATGGCAATAAGTTATCTGGTTCTTTGCCTGATGAACTTGGCAATCTCTCAAACTTGATTAGGCTCCAAGTTGACCTAAACCAATTGTCAGGTCCAATACCACTATCATTTGCCAACTTGGTCAATGTTAAGCATCTCCACTTGAACAACAACTCATTTACTGGTCGAATTCCAAGCGAACTTGCAAAGTTACCCAATCTACTGCATTTACTTGTGGACAATAACAACTTTTCCGGCCATCTTCCACCAGAATTTTCCACATCACCGGTGTTGCGCATACTCCAAGTCGATAACAATAACTTCAGTGGAGCAGCAATTCCTTCTACCTATGCAAACTTTTCCAGGCTAGTAAAACTAAGTCTTAGAAACTGCAGCTTGCAAGGGGCTGTTCCTGATATGAGTTCGATAAAGGAGCTAAGCTATTTGGATCTTAGCTGGAATCATCTTGCTGGGCCCATACCAGCAAAGAAACTCTCAGATAATATGACAACTATTGACCTATCAAATAATAAGATCAACGGATCTATTGCTGGAAGCATCAAATTACTTCCTTTACTTCAAAGATTGTCACTAGCGAACAATTCTCTGTCTGGATCCATCCCTGCAAGTTTATGGCAAAACATGTCCTTAAATAGGAGCTCTAAGCTCACAATTGATCTCCGCAATAATTCATTTTCAGACATTTCAGGCAGTTCTAGGGTACCAGAAAATGTCACCTTGAGACTTGCTGGCAATCCTATCTGCAAGAATTCCAACATTCGAAATATTGATCAATATTGTGACTCCAAAGGGATTGAATTCGAGAAACCTGTGATGAATTCAACAACTTTCTGTCCTGCTCAAGCTTGTCCAAAGGATGATTTCTACGAATATGTCCCAGATTCTCCTGTTCCCTGTTATTGTGCAGCACCCCTAAGAATTGGATATCGTCTGAAAAGCCCAAGTTTCTCTTTCTTTTCTCCTTATAGAACTTATTTTGAGTCATATCTGGCTGGGTCTTTACATTTGGACCTATACCAAATATGGATAGATTCAGCTGCTTGGGAAGCAGGACCTCGTCTTAGGATGTATTTGAAAGTTTATCCTAATTACAATGATTTCCGCTCTAATAAGTTCAATACAAGTGAGGTCCGGCGTATTCAAGGCATGTTTGGATCATGGAATTTTCCTCCCACCGATTTTTTTGGACCATATGAACTCCTGAACTTCACTCTCCTCGGACCTTATGAAGAATTCACTTTTGGGACAAATAATGGGAAGATCAGTACAACTGTGGTAGTAGTTGCCATAATTGTAGCTTTTTTTTGTGCTGGCATGATCTCTGCAATTGTCACTCTTGTGATGGCCAGAAGACATATCAAATACTGGCCCAAGTTATCCAGGAATCATATTTCCTCTAATATTTCCATCAAAATTGATGGTGTGAAAGCATTCACTTTCAAAGAACTGGCTCCTGCAACTGACAATTTCAGCAGTTCAGCTGTAGTTGGCCACGGAGGTTATGGGAAGGTTTATAAAGGCACTCTTTTTGATCAAACAGTTGTGGCTGTGAAGCGAGCAGATGAACATTCTTTACAAGGCCAAAGAGAATTTTTGACTGAGATTGAACTTCTGTCAAGGTTACATCATCGAAATCTAGTTTCATTGGTCGGATACTGTGATGAAGAAGGAGAGCAGATTCTGGTTTACGAATTCATGCCTAATGGTACCTTGCGGGACTGGATTTCTGGTAAAAGGAAGGGAAGCCTAAACTTTGATATGAGGATGAGGATTGCAATGGGGGCCTCCAAAGGCATATTGTATCTCCATACTGAGGCTAACCCTCCCATATTCCACCGAGATATTAAAGCTAGCAACATACTTCTGGACCGCACGCTGGTTGCTAAAGTGGCTGACTTTGGACTCTCACGTCTTGCACCAAATATGGATGACGAAGGGAACATGCCTAAATATGTGTCAACAGTTGTGAGGGGAACACCAGGTTACTTAGATCCTGAGTACTTTTTGACTCATAAGTTAACGGACAAAAGTGACGTTTATAGCTTGGGAATTGTGTTTCTGGAGCTTCTGACAGGCATGCATCCAATATCACATGGGAAAAACATTGTTCGTGAGGTTAACGAGGCGCGTCAGTGTGGCACCATAGCTTCCATTATAGATAGCAAAATGGGTTCTTATCCATCAGATTGTGTGGACAAGTTTCTAAATCTTTCCCTCGGTTGTTGCCATGAGAATCCAGAGGAGAGACCGTGCATGGTAGATGTGGTGAGGGAGCTGGATATTATTCTCACAATGTTGCCAGATTCTGAAACTGCTTTCCCAGACGGTGGATATGATTTCTCTGTAAAAATGGCTTCATCGTCATCATCATCAAAGTCCTACATGGCACGGGACGGCCAACACATGTCATCTCCTATGTTGTCAGGAAGCAACCTCGTCAGTGATGTTATTCCCACCATCGTTCCTCGTTAA 2868 0.4177 MRRTKLYGFGLGFSFFCFILAAAAQKTHPSEVNALVQIKKSLIDPKNHLRNWNKGDPCTSNWTGVWCFGSVGTDGYFHVHELYLMTSNLSGSLASQLGQLSQLQIMNFMWNNLTGTIPKEIGNIKSLKLLLLNGNKLSGSLPDELGNLSNLIRLQVDLNQLSGPIPLSFANLVNVKHLHLNNNSFTGRIPSELAKLPNLLHLLVDNNNFSGHLPPEFSTSPVLRILQVDNNNFSGAAIPSTYANFSRLVKLSLRNCSLQGAVPDMSSIKELSYLDLSWNHLAGPIPAKKLSDNMTTIDLSNNKINGSIAGSIKLLPLLQRLSLANNSLSGSIPASLWQNMSLNRSSKLTIDLRNNSFSDISGSSRVPENVTLRLAGNPICKNSNIRNIDQYCDSKGIEFEKPVMNSTTFCPAQACPKDDFYEYVPDSPVPCYCAAPLRIGYRLKSPSFSFFSPYRTYFESYLAGSLHLDLYQIWIDSAAWEAGPRLRMYLKVYPNYNDFRSNKFNTSEVRRIQGMFGSWNFPPTDFFGPYELLNFTLLGPYEEFTFGTNNGKISTTVVVVAIIVAFFCAGMISAIVTLVMARRHIKYWPKLSRNHISSNISIKIDGVKAFTFKELAPATDNFSSSAVVGHGGYGKVYKGTLFDQTVVAVKRADEHSLQGQREFLTEIELLSRLHHRNLVSLVGYCDEEGEQILVYEFMPNGTLRDWISGKRKGSLNFDMRMRIAMGASKGILYLHTEANPPIFHRDIKASNILLDRTLVAKVADFGLSRLAPNMDDEGNMPKYVSTVVRGTPGYLDPEYFLTHKLTDKSDVYSLGIVFLELLTGMHPISHGKNIVREVNEARQCGTIASIIDSKMGSYPSDCVDKFLNLSLGCCHENPEERPCMVDVVRELDIILTMLPDSETAFPDGGYDFSVKMASSSSSSKSYMARDGQHMSSPMLSGSNLVSDVIPTIVPR 955
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi11g0395 955 CDD STKc_IRAK 628 894 - -
Mibi11g0395 955 ProSitePatterns Protein kinases ATP-binding region signature. 628 650 IPR017441 GO:0005524
Mibi11g0395 955 FunFam Probable LRR receptor-like serine/threonine-protein kinase At1g06840 29 190 - -
Mibi11g0395 955 PANTHER RECEPTOR-LIKE PROTEIN 55 38 892 - -
Mibi11g0395 955 SUPERFAMILY Protein kinase-like (PK-like) 607 922 IPR011009 -
Mibi11g0395 955 Pfam Leucine rich repeat N-terminal domain 29 67 IPR013210 -
Mibi11g0395 955 SUPERFAMILY L domain-like 45 387 - -
Mibi11g0395 955 ProSiteProfiles Protein kinase domain profile. 622 895 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi11g0395 955 Gene3D Ribonuclease Inhibitor 289 409 IPR032675 -
Mibi11g0395 955 Gene3D Transferase(Phosphotransferase) domain 1 698 903 - -
Mibi11g0395 955 FunFam LRR receptor-like serine/threonine-protein kinase HSL2 698 906 - -
Mibi11g0395 955 SMART serkin_6 622 894 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi11g0395 955 Gene3D Phosphorylase Kinase; domain 1 593 697 - -
Mibi11g0395 955 ProSitePatterns Serine/Threonine protein kinases active-site signature. 742 754 IPR008271 GO:0004672|GO:0006468
Mibi11g0395 955 FunFam Leucine-rich repeat protein kinase family protein 588 697 - -
Mibi11g0395 955 Pfam Protein kinase domain 624 888 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi11g0395 955 Gene3D Ribonuclease Inhibitor 28 189 IPR032675 -
Mibi11g0395 955 Gene3D Ribonuclease Inhibitor 190 288 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi11g0395 Mibi-ChrMibi11 6529502 6542809 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi11g0395 5 903 Receptor kinase-like Gene Family AT5G01950 61.308 0.0 1101
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VIII-1 Mibi11g0395 Pkinase 9.3e-48 CL0016