Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi11g0385 ATGGCTTCCCTTCTTCGTCTTCCTCCTGCAACATATACCCTTCAACACAATCTTATGACAATACCCTTCTCTTCTCTGAAACCCATTTCACCAAATAACATTTCTTTCCTCACTCACCGTTTCAAGAGTAACACTGTAAAGTGTAAAGCTTTTCTGGACAACATTCCTAACGATTTGTTGGAGAACACTATATACCTGAGTCAATCCCCTGTTCTTCGATCAGGATTAGTCCAGTTTCAGAGGTTAACTGAAGATTTATCAGATTTCCAGAAGTGGGGTTTCCTTGTTTTTGCAGGATTGACTTGGATTTACTTGACTGCTAGGCCTGGTGTTCTTATAGGTGCCATTGATGCCTATCTTCTGGCTCCTCTGCAAATTGGTTTGGACAATTTATCAGGAAGAAGGAATCTCAAGAGGACTGATTTTATGATTGGAGATAAGATTGGGGAAGGGTCATTTGGTGTTGTTTATTCTGGTGTTGTGGTTCCAAAGAATGGTTATGTTGAAGAGAATGTGCAACAGAAGAGGGGAAGAGGCAAGACTGCAACAAATTTGAATGTGAAATCTAAGGATAAAGTCATTCTCAAGAAGGTGAAGGTTGGAACTGTAGGGGCTGAACAATTCGGTGACTTTGAGGAGTGGTTCAATTACAGGCTTTCCAGAGCAGCTCCTGAAACATGTGCTGAATTCCTGGGAAGTTTTGTTGCTGATAGAACAAATTCACAATTCGTAAAGGGTGGAAAATGGCTTGTTTGGAAGTTTGAGGGAGACCGCACTCTTGCTGATTACATGAAAGATCGTAACTTTCCAGCAAACTTAGAGTCTGTAATGTTTGGAAGTGTCTTGCAAGGTGTAGACTCTTCTAAACGAAATGCATTGATCATCAAGCAAATAATGCGTCAGATCATTACATCTCTTAAGAAAATTCACAACACAGGCATTGTTCACAGAGATGTAAAGCCTGCCAACTTGGTAGTCACTAAACGGGGGCAGATTAAACTAATAGATTTCGGTGCAGCAACAGACCTTCGAATTGGAAAGAATTATATACCTGACAGTACCTTACTGGATCCTGATTACTGTCCCCCGGAATTATACGTTCTCCCAGAAGAAACACCAAATCCTCCTCCAGAGCCAATTGCAGCTTTCCTTTCACCAATCTTGTGGCAGCTGAACAGTCCTGATCTGTTTGACATGTACTCTGCTGGAGTTGTACTCCTGCAAATGGCTATACCATCCTTAAGGTCTCCAGCTGCTATAAAGAACTTTAAGTTGGAAATCAAAACATGTCAGTATGACTTGAACAAATGGAGAGATTATACACGCCTGAGGCCCAACTTTGAGATTCTTGACTGTGACTCGGGTAGAGGGTGGGACTTAGCAACCAAGCTTATCTGTGAGAGAGGTCCCTTTAGAAGAGGACGTTTATCTGCTGCTGATGCTTTGAGGCATCCCTATTTTCTTCTGGGTGGTGATCAAGCTGCTGCAGTACTTTCAAAATTGAGCCTAAGCAGAAAGTGA 1521 0.4195 MASLLRLPPATYTLQHNLMTIPFSSLKPISPNNISFLTHRFKSNTVKCKAFLDNIPNDLLENTIYLSQSPVLRSGLVQFQRLTEDLSDFQKWGFLVFAGLTWIYLTARPGVLIGAIDAYLLAPLQIGLDNLSGRRNLKRTDFMIGDKIGEGSFGVVYSGVVVPKNGYVEENVQQKRGRGKTATNLNVKSKDKVILKKVKVGTVGAEQFGDFEEWFNYRLSRAAPETCAEFLGSFVADRTNSQFVKGGKWLVWKFEGDRTLADYMKDRNFPANLESVMFGSVLQGVDSSKRNALIIKQIMRQIITSLKKIHNTGIVHRDVKPANLVVTKRGQIKLIDFGAATDLRIGKNYIPDSTLLDPDYCPPELYVLPEETPNPPPEPIAAFLSPILWQLNSPDLFDMYSAGVVLLQMAIPSLRSPAAIKNFKLEIKTCQYDLNKWRDYTRLRPNFEILDCDSGRGWDLATKLICERGPFRRGRLSAADALRHPYFLLGGDQAAAVLSKLSLSRK 506
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi11g0385 506 SUPERFAMILY Protein kinase-like (PK-like) 140 488 IPR011009 -
Mibi11g0385 506 SMART serkin_6 142 487 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi11g0385 506 Pfam Protein kinase domain 294 487 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi11g0385 506 ProSiteProfiles Protein kinase domain profile. 142 487 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi11g0385 506 ProSitePatterns Serine/Threonine protein kinases active-site signature. 314 326 IPR008271 GO:0004672|GO:0006468
Mibi11g0385 506 PANTHER SERINE/THREONINE-PROTEIN KINASE STN8, CHLOROPLASTIC-RELATED 55 506 - -
Mibi11g0385 506 Gene3D Transferase(Phosphotransferase) domain 1 285 489 - -
Mibi11g0385 506 Gene3D Phosphorylase Kinase; domain 1 129 254 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi11g0385 Mibi-ChrMibi11 6350537 6353487 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi11g0385 142 343 MAP Kinase Kinase Kinase AT3G13530 24.878 2.04e-11 65.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK Group-Pl-4 Mibi11g0385 Pkinase 4.2e-21 CL0016
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi11g0385 11 6350537 6353487 Mibi11g0385 11 6350537 6353487 ECH