LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Mibi11g0372	ATGGCAGTGAAGGAACTAGAGAAAGGGAGAGAGTTTGCTACCCAGCTTCGAGGATTGATATTTCAAGATGACTATTATGATTATGATAAGGCTAAGGTGCTAGATTCTGCTGAGGATCTGGTGGCCAAAGTGCTTGATTCCTTCACCAACACACTCTCTCTCTTGAACCATAATAATGTTTCCGCAGGCTCCTCCATTTCTTCTTCTTCTTCCATCTCTCATCACTTTCCTTCTAACTCTGATGAGTCACAAGAAGAGAGCCCTGTGACCAAAAGAAGCCCCACCTCTTCCTCCATCAAAGATCCAACAAGACCTTCTCCCAAGAAAAGGAAAAGTACGGTACAGACGTGGGTGGAGGACTCCAAAATGAGTCCAAAGGAAGATGGGCATGCATGGAGAAAATATGGCCAAAAGCTCATACTCAACACTAAACATCCAAGGAACTACTTTAGATGCACTCACAAGCATGACCAAGGATGTGAAGCAACAAAACAAGTTCAGAAAATCCGAGACGATCCTCCTCTCTACAGAACCACTTATGTTGGCCACCACACTTGCACCAACCTCCTCAATCCTCTCAGCTTTCTTGATGATTCTCATGAACACCTTAATTCATCCTCTTCTTATATTCTCAGCTTCGACAAGAATTACAACAATGACAATAATCATATTACCACCTTTGACCCAAAAGTCAACAAGAACAAGAACAATAACAACAACAATACTAGCTCTTTCTTAATCCAACAAAACCATGGTAATCGCTTTCTCTCGTCTGGCTCTTTATTTCCATCTTCTGGTTCTGTCAAAACCGAGGAGCAATGTCACAATATCAAGCAAGAGAAGAAGAAGAACATTAATAATAATGATAAAATTAATGATGTTGGTGTTCCTTCAAGTTCATCCAATGACTGCCTTGTGCCTCCTCATGATCAAGAAGCTGTTGCTCCTTCTTTTGGATCTGGTGGTGATGATCAACTGGACGTGTTAAATTCTCCTCCATTTTTTGATCCTCTCCTGTTTGAATTTGAAGATCTCTTATCACTTGAGATTATTTGA	1056	0.4091	MAVKELEKGREFATQLRGLIFQDDYYDYDKAKVLDSAEDLVAKVLDSFTNTLSLLNHNNVSAGSSISSSSSISHHFPSNSDESQEESPVTKRSPTSSSIKDPTRPSPKKRKSTVQTWVEDSKMSPKEDGHAWRKYGQKLILNTKHPRNYFRCTHKHDQGCEATKQVQKIRDDPPLYRTTYVGHHTCTNLLNPLSFLDDSHEHLNSSSSYILSFDKNYNNDNNHITTFDPKVNKNKNNNNNNTSSFLIQQNHGNRFLSSGSLFPSSGSVKTEEQCHNIKQEKKKNINNNDKINDVGVPSSSSNDCLVPPHDQEAVAPSFGSGGDDQLDVLNSPPFFDPLLFEFEDLLSLEII	351

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Mibi11g0372	351	ProSiteProfiles	WRKY domain profile.	121	184	IPR003657	GO:0003700\|GO:0006355\|GO:0043565
	Mibi11g0372	351	MobiDBLite	consensus disorder prediction	264	319	-	-
	Mibi11g0372	351	SUPERFAMILY	WRKY DNA-binding domain	122	187	IPR036576	GO:0003700\|GO:0006355\|GO:0043565
	Mibi11g0372	351	MobiDBLite	consensus disorder prediction	224	245	-	-
	Mibi11g0372	351	MobiDBLite	consensus disorder prediction	63	78	-	-
	Mibi11g0372	351	SMART	WRKY_cls	126	188	IPR003657	GO:0003700\|GO:0006355\|GO:0043565
	Mibi11g0372	351	MobiDBLite	consensus disorder prediction	273	288	-	-
	Mibi11g0372	351	MobiDBLite	consensus disorder prediction	63	130	-	-
	Mibi11g0372	351	Pfam	WRKY DNA -binding domain	127	186	IPR003657	GO:0003700\|GO:0006355\|GO:0043565
	Mibi11g0372	351	MobiDBLite	consensus disorder prediction	289	306	-	-
	Mibi11g0372	351	PANTHER	WRKY TRANSCRIPTION FACTOR 21-RELATED	5	222	IPR044810	GO:0003700
	Mibi11g0372	351	MobiDBLite	consensus disorder prediction	103	130	-	-
	Mibi11g0372	351	Gene3D	WRKY domain	108	181	IPR036576	GO:0003700\|GO:0006355\|GO:0043565

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Mibi11g0372	Mibi-ChrMibi11	6047853	6050060	Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Mibi11g0372	2	203	WRKY Transcription Factor Family	AT3G56400	36.946	1.81e-32	121

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	TF	WRKY	Mibi11g0372		WRKY	2e-24	CL0274