Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi11g0365 ATGCAATATACCCATTTCTTGCTTCTTCTTCTTCTTTTTGCTCCAGTCCTGGTAATCTCCACTGACCCAGGATTCAACGACGACGTTTTGGGGTTGATTGTGTTCAAAGAGGGTCTAAAGGACCCAAAATCTAAGCTTTCTAGTTGGAACGAAGATGATGAAACTCCCTGCAATTGGGTCGGAGTCAAATGTGACCCGACAACCCGACGTGTCTCTGCTTTAGTGCTTGATGGGTTTTCTCTTTCAGGGCATATTGATAAAGGGTTGATGAGATTGCAGTTCCTTCAAGTTCTATCACTTTCTAGGAACAACTTTAGTGGGACCATAATTCCTGATCTTCCTCGCCTTTGGAGTTTGCAACTTGTTGATTTGAGTGAGAATAATCTCTCCGGATCAATCCCACAAGAGTTTTTCCAGCAATGTGGGTCTTTAAGAGCTGTTTCATTTGCAAGAAACAATCTTTCAGGTAAAATCCCTGATTCTCTAAGCTCTTGCTCTATGTTAGCTACTGTTAACTTCTCTCATAATCAACTTTCTGGTGAATTGCCTTCTGGGATTTGGAATTTGAGGGGATTGCAGTCACTTGATCTGTCTAATAACTTGCTTGGGGGAGAGATTCCTGAGGGAATTGAGAATCAGAATGATTTGAGAGAGTTGATTCTTCAGAAGAATCGTTTTATTGGTAGGATTCCTGAGGGTATTGGAGGTTGCTTGCTCTTGAAATCACTTGATTTTAGTGATAATTTCCTCTCTGGGAGGCTTCCTGATTCAATGCAGAAACTTAGCTCATGCACTTCTCTCAGTTTACAGGGGAATTCATTCACAGGAGGCATTCCTGATTGGGTTGGAGAGTTGAAAAATCTGGAGATATTGGACCTTTCTTCAAATGCATTCTCAGACTGGATTCCTAAATCAATAGGAAATCTTGATTCCCTGAGTAAATTGAATCTCTCAAGGAACCAACTCACAGGAAACTTGCCAGAGTCAATGGGCAACTGCATTAAGCTCTTGGATATTGACATGAGCCACAATAAGTTATATGGCCACATTCCTTCATGGATGTTTAAGATGGGTTTGAAAAGTATTTCACTTTCATGGGACAACTTCACCAAGGGCAATATCCCCTCGCTTTCGTCCTCATCCACGTCTTATTATGGCCTCCAGGTTTTGGATTTGTCATCCAATGCATTTTCTGGTGGTCTTCCATCTAGCATTGGTGGTCTTAGTAGCTTGCAAGTTTTAAACATGTCCACCAATAATATCTCTGGTGCTATTCCAGTGAGTATAGGAGAGCTTAAATCTTTGTTCATTCTTGACCTTAGTGACAACAAGATTAATGGGAGCATCCCTTCTGAGATAGAAGGGTTGATTTCACTGAGTGAACTGAGACTGCAGAGGAATTTCCTGAGTGGGAAAATTCCAACCCAAATTTATAAGTGTTCATCCCTGACATATCTGAATCTTCATCACAACAAGCTTACTGGTTCAATCCCTTCAGCCATTGCTAATTTATCCAACCTTCAGCACATGGACTTGTCATGGAATGAACTTTCTGGAAACTTGCCAAAGGAGCTGACAAATCTTTCTCACCTTTTTTCCTTTAATGTTTCCTACAACCACCTTCATGGTGAGCTACCTGTGGGTGGCTTCTTCAATACCATCCCTCCCTCATCTGTCTCTGCTAATCCATTGTTATGTGGTTCCATTGTTAATCACTCCTGCCCATCTGTTCATCCCAAACCGATTGTCCTTAACCCGAACTCTTCCGGCTCAAATTCTGGTCCTTCCTCTCAAAACCGTCGTCATAAGAAGGTCATTCTTAGTATATCTGCCCTTATTGCTATTGGAGCTGCTGCTTTTATCATCATTGGTGTGGTGGCTATTACACTGCTAAATATGCATGCACGTAACTCAATGTCACGTTCTGCTGCCCCATTCGCGTTATCCGGTGGTGAAGACTATAGTTGTTCGCCCAAAGATGATCCAAACTATGGCAAGCTTGTAATGTTTACTGGAGATGCTGAATTTGCTGATGGGGCTCATAATCTTCTCAATAAAGACAATGAGATTGGTCGTGGCGGATTCGGAGTTGTTTATCGCACTATTCTTCGAGACGGGCGTTCTGTTGCAATCAAGAAACTTACTGTCTCTAGTCTGGTCAAGTCCCAAGAAGATTTTGAAAAGGAAGTGAAAACACTTGGGAAGATGAGCCACCAGAATCTTGTGGCACTTGAAGGTTATTATTGGACTTCATCCTTGCAGCTTCTGATCTATGAGTACTTATCCAGAGGGAGTTTACATAAGCTTTTACATGATGAAAATACGAAGGACATCCTTTCATGGGGACAAAGGTTCAAGATTATTCTCGGCATGGCAAAAGGGTTAGCCCATTTGCACCAAATGAACATAATTCACTATAATCTGAAATCAACAAATGTTCTGATTGACTGTTCTGGTGAGCCAAAAATAGGAGATTTTGGCTTAGTGAGGCTATTGCCAATGCTGGACCATTGTGTCTTGAGCAGCAAGATTCAAAGTGCGCTCGGATATATGGCACCTGAGTTTGCTTGTCGCACGGTGAAGATAACTGAGAAATGTGATTTATACGGGTTTGGGGTCCTAGTTCTTGAGTTGGTGACCGGAAAAAGACCTGTGGAATACATGGAGGATGATGTGGTTGTTCTGTGTGACATGGTAAGAGGAGCATTGGAGGAAGGAAAGGTGGATCAATGCATCGATCCGAAGCTTCTGGGAAATTTTGCTGCAGAAGAAGCAATTCCTGTGATAAAATTAGGATTAATATGTGCATCACAGGTGCCATCAAACCGACCAGACATGGCTGAAGTAGTCAACATATTAGAGTTGATACAGTGCCCTTCAGAAGGACAAGAAGAAATAGAATGA 2904 0.4198 MQYTHFLLLLLLFAPVLVISTDPGFNDDVLGLIVFKEGLKDPKSKLSSWNEDDETPCNWVGVKCDPTTRRVSALVLDGFSLSGHIDKGLMRLQFLQVLSLSRNNFSGTIIPDLPRLWSLQLVDLSENNLSGSIPQEFFQQCGSLRAVSFARNNLSGKIPDSLSSCSMLATVNFSHNQLSGELPSGIWNLRGLQSLDLSNNLLGGEIPEGIENQNDLRELILQKNRFIGRIPEGIGGCLLLKSLDFSDNFLSGRLPDSMQKLSSCTSLSLQGNSFTGGIPDWVGELKNLEILDLSSNAFSDWIPKSIGNLDSLSKLNLSRNQLTGNLPESMGNCIKLLDIDMSHNKLYGHIPSWMFKMGLKSISLSWDNFTKGNIPSLSSSSTSYYGLQVLDLSSNAFSGGLPSSIGGLSSLQVLNMSTNNISGAIPVSIGELKSLFILDLSDNKINGSIPSEIEGLISLSELRLQRNFLSGKIPTQIYKCSSLTYLNLHHNKLTGSIPSAIANLSNLQHMDLSWNELSGNLPKELTNLSHLFSFNVSYNHLHGELPVGGFFNTIPPSSVSANPLLCGSIVNHSCPSVHPKPIVLNPNSSGSNSGPSSQNRRHKKVILSISALIAIGAAAFIIIGVVAITLLNMHARNSMSRSAAPFALSGGEDYSCSPKDDPNYGKLVMFTGDAEFADGAHNLLNKDNEIGRGGFGVVYRTILRDGRSVAIKKLTVSSLVKSQEDFEKEVKTLGKMSHQNLVALEGYYWTSSLQLLIYEYLSRGSLHKLLHDENTKDILSWGQRFKIILGMAKGLAHLHQMNIIHYNLKSTNVLIDCSGEPKIGDFGLVRLLPMLDHCVLSSKIQSALGYMAPEFACRTVKITEKCDLYGFGVLVLELVTGKRPVEYMEDDVVVLCDMVRGALEEGKVDQCIDPKLLGNFAAEEAIPVIKLGLICASQVPSNRPDMAEVVNILELIQCPSEGQEEIE 967
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi11g0365 967 ProSiteProfiles Leucine-rich repeat profile. 482 505 IPR001611 GO:0005515
Mibi11g0365 967 FunFam Putative LRR receptor-like serine/threonine-protein kinase IRK 305 578 - -
Mibi11g0365 967 ProSitePatterns Protein kinases ATP-binding region signature. 690 713 IPR017441 GO:0005524
Mibi11g0365 967 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 186 954 - -
Mibi11g0365 967 FunFam probable LRR receptor-like serine/threonine-protein kinase IRK 678 760 - -
Mibi11g0365 967 Pfam Leucine Rich Repeat 240 261 IPR001611 GO:0005515
Mibi11g0365 967 Pfam Leucine Rich Repeat 192 211 IPR001611 GO:0005515
Mibi11g0365 967 Gene3D Ribonuclease Inhibitor 304 580 IPR032675 -
Mibi11g0365 967 SUPERFAMILY L domain-like 285 556 - -
Mibi11g0365 967 Gene3D Phosphorylase Kinase; domain 1 669 760 - -
Mibi11g0365 967 SUPERFAMILY Protein kinase-like (PK-like) 684 957 IPR011009 -
Mibi11g0365 967 SMART LRR_typ_2 481 503 IPR003591 -
Mibi11g0365 967 SMART LRR_typ_2 116 140 IPR003591 -
Mibi11g0365 967 SMART LRR_typ_2 189 213 IPR003591 -
Mibi11g0365 967 SMART LRR_typ_2 309 333 IPR003591 -
Mibi11g0365 967 SMART LRR_typ_2 285 308 IPR003591 -
Mibi11g0365 967 SMART LRR_typ_2 456 480 IPR003591 -
Mibi11g0365 967 SMART LRR_typ_2 504 527 IPR003591 -
Mibi11g0365 967 SMART LRR_typ_2 408 432 IPR003591 -
Mibi11g0365 967 SMART LRR_typ_2 528 552 IPR003591 -
Mibi11g0365 967 Gene3D Ribonuclease Inhibitor 26 303 IPR032675 -
Mibi11g0365 967 FunFam probable LRR receptor-like serine/threonine-protein kinase IRK 761 962 - -
Mibi11g0365 967 CDD STKc_IRAK 690 956 - -
Mibi11g0365 967 ProSiteProfiles Protein kinase domain profile. 684 956 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi11g0365 967 Gene3D Transferase(Phosphotransferase) domain 1 761 965 - -
Mibi11g0365 967 Pfam Leucine rich repeat 458 517 IPR001611 GO:0005515
Mibi11g0365 967 Pfam Leucine rich repeat 387 445 IPR001611 GO:0005515
Mibi11g0365 967 Pfam Leucine rich repeat 265 322 IPR001611 GO:0005515
Mibi11g0365 967 Pfam Protein kinase domain 685 892 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi11g0365 967 FunFam Putative LRR receptor-like serine/threonine-protein kinase IRK 26 304 - -
Mibi11g0365 967 SMART LRR_sd22_2 504 530 - -
Mibi11g0365 967 SMART LRR_sd22_2 189 212 - -
Mibi11g0365 967 SMART LRR_sd22_2 285 311 - -
Mibi11g0365 967 SMART LRR_sd22_2 432 458 - -
Mibi11g0365 967 Pfam Leucine rich repeat N-terminal domain 26 65 IPR013210 -
Mibi11g0365 967 SUPERFAMILY L domain-like 42 370 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi11g0365 Mibi-ChrMibi11 5962453 5965477 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi11g0365 9 964 Receptor kinase-like Gene Family AT5G01890 61.371 0.0 1119
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VII-1 Mibi11g0365 Pkinase 1.6e-42 CL0016