Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi11g0357 ATGCATCGCCGATTTCTAGACACCGGTCTAACAGTATCACCATCGTACGGAAACAAAACCAGAGAATCATTCACCGGAGACGTGAACTTCGACGCGAACATGGTGATTATACTTACGGCCTTATTATGCGCATTGATCTGCGCGCTAGGGTTGAATTCGATTGTACGGTGCGTTTTACGGTGTACGGATAGCACAGAGCAAACGACGGCGACTGCTACTACTAGGGGGCTGAAGAAGCGTCAGCTGAGGAAGATTCCGGTGACGGAGTACGGCGGCGGAGGGAATATTCCGGCGGCGACGACGGAGTGTCCGATATGCCTTGGGGAATTTGAGAAAGGAGATAAGGTGAGAATGCTGCCAAAATGTAATCACGGGTTTCATGTGAGGTGTATAGACACTTGGCTTTTGTCACATTCTTCTTGCCCTAATTGTCGCCATTCCCTCCTTGAGAAGTCTGTGAATTCCAACTTGATTGGTGGTGGTGGTGTCCCCGGAGCTCCGGCGCCGGCGGTGGTCGGCGAGCAGGCAAGTTGA 534 0.5187 MHRRFLDTGLTVSPSYGNKTRESFTGDVNFDANMVIILTALLCALICALGLNSIVRCVLRCTDSTEQTTATATTRGLKKRQLRKIPVTEYGGGGNIPAATTECPICLGEFEKGDKVRMLPKCNHGFHVRCIDTWLLSHSSCPNCRHSLLEKSVNSNLIGGGGVPGAPAPAVVGEQAS 177
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi11g0357 177 ProSiteProfiles Zinc finger RING-type profile. 103 145 IPR001841 -
Mibi11g0357 177 SMART FANCL_C_2 99 152 - -
Mibi11g0357 177 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 61 150 IPR013083 -
Mibi11g0357 177 SUPERFAMILY RING/U-box 102 151 - -
Mibi11g0357 177 Pfam Ring finger domain 102 145 IPR001841 -
Mibi11g0357 177 PANTHER RING-H2 FINGER PROTEIN ATL78 23 152 IPR044602 GO:0016567|GO:0016740
Mibi11g0357 177 SMART ring_2 103 144 IPR001841 -
Mibi11g0357 177 CDD RING-H2_EL5_like 102 145 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi11g0357 Mibi-ChrMibi11 5824207 5824740 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi11g0357 13 149 C3H Transcription Factor Family AT3G10910 57.333 4.84e-51 160
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi11g0357 11 5824207 5824740 Mibi11g0357 11 5824207 5824740 ECH