Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi11g0348 ATGGGGAATTATAGGTTTAGGTTATCAGATATGATCCCTAATGCTTGGTTTTACAAGCTGAGGGACATGGGGATGAAGAAGAACAACCAGACATTGGAAAACAGGAAGAAGAAGAAGAAGAAGGAATCTTTATCAACTTCAACAACCTCAAAAACATCAAAACCAAAGCAACCCCACAACCAAAGCACTCCCAGAAAGTCTTACCACTTTACCAGAGAGCTCAATGATCCAACAACAGATAGAGATAGAATCTCCACTTCACCACCTTCCTCTAACCCAAAAATCTCTGTTTCGGACACCAATTTCCCAGAAACACCCAGAAAATCACCCTCCAAACAGAACACTAAGAGAAGAACCACAAGAACTTCTCCAAAATTCGTGTCTTCCTCTGTTTCTTCTAGCTGTCACTGCCGAACCACCATCGAATCCGTTTGGACCAAATCAGATTCCCCACGTGAGAACTCATCTTCTCCGTTTGATGATGACAGCTCTGTTGTTGATTTAGAATCCCCAGAACCAGAGTTCAGAACAGACCGTGTCCTCCCCACTGAGTCCTCATTTGATGATGATGGTGATTTCCATGAAAACGACATCGTAATCGACGTGGACAAGAATTCAATCGCAAGAAAAGATGATAAGCTTGATGGGTTTGATCCATTATCCCAGTTTGAACTACCTCCTATCATAACCAAGCCAACGAAATTCAAGAATAAACAAAACAGAGTCGCCAAAAACAGAGCAGCCACATTCCAAGAACAAGGGAATCAGAAAGTTAAGATTTTGAAGGAAGATTCCGAGATTCAAAGGGAAATGAAGACAACCCATGTAAGGAGATTCTCTGTTAGCTCGCCGGGGGTGAAGATTCGGGTGAATTCGCCGAGAATTAGCTGCCGGAAAAGTCAGGGGTACGGTGGCCGGAAAAGTGTGTCGGCGGCGGCGAGGGGCGACCGGAGAAGTATCTCCAGTAGCTTTGCGGTGGTGAAGTCGTCATTTAATCCACAGAAGGATTTCAGAGAATCAATGGTGGAGATGATTGTGGAGAACAATATTAGAGCATCCAAGGATTTGGAAGATCTTCTTGCTTGTTATCTCTCTCTGAATTCAGAAGAATATCACGACCTCATCATCAAAGTGTTCAAGCAGATATGGTTTGATTTGACTGACACTCATTAG 1173 0.4339 MGNYRFRLSDMIPNAWFYKLRDMGMKKNNQTLENRKKKKKKESLSTSTTSKTSKPKQPHNQSTPRKSYHFTRELNDPTTDRDRISTSPPSSNPKISVSDTNFPETPRKSPSKQNTKRRTTRTSPKFVSSSVSSSCHCRTTIESVWTKSDSPRENSSSPFDDDSSVVDLESPEPEFRTDRVLPTESSFDDDGDFHENDIVIDVDKNSIARKDDKLDGFDPLSQFELPPIITKPTKFKNKQNRVAKNRAATFQEQGNQKVKILKEDSEIQREMKTTHVRRFSVSSPGVKIRVNSPRISCRKSQGYGGRKSVSAAARGDRRSISSSFAVVKSSFNPQKDFRESMVEMIVENNIRASKDLEDLLACYLSLNSEEYHDLIIKVFKQIWFDLTDTH 390
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi11g0348 390 Pfam DNA-binding domain 1 40 IPR025830 GO:0003677
Mibi11g0348 390 MobiDBLite consensus disorder prediction 146 163 - -
Mibi11g0348 390 MobiDBLite consensus disorder prediction 81 109 - -
Mibi11g0348 390 MobiDBLite consensus disorder prediction 28 132 - -
Mibi11g0348 390 TIGRFAM A_thal_3678: uncharacterized plant-specific domain TIGR01568 324 387 IPR006458 -
Mibi11g0348 390 Pfam Transcriptional repressor, ovate 330 386 IPR006458 -
Mibi11g0348 390 PANTHER TRANSCRIPTION REPRESSOR OFP7-RELATED 43 387 IPR038933 GO:0045892
Mibi11g0348 390 MobiDBLite consensus disorder prediction 46 68 - -
Mibi11g0348 390 ProSiteProfiles OVATE domain profile. 326 385 IPR006458 -
Mibi11g0348 390 MobiDBLite consensus disorder prediction 28 45 - -
Mibi11g0348 390 MobiDBLite consensus disorder prediction 146 177 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi11g0348 Mibi-ChrMibi11 5650720 5651892 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF OFP Mibi11g0348 Ovate 3.5e-24 No_clan