Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi11g0346 ATGTTTCAAACTATTCGACAACTTCATAGAGATATTGACGCTGAGGAAAGTGCATTAGAATCTACTTCTCCAGCCAAAGATGATGAACTGGAACTAGAAATAAACGGAGTTTTGTTTGAAAAATACAAAATTTGCCGTCTACTTGGTGTGGGAGGCTTCGCAAAAGTTTACGAAGCTACCAATGTTTTGAGCAAACAAATTGTAGCCATCAAAGTCGTGAGCAAGCGCACTATAAGAGAACGCGGCCTCACGGCGCAAGTCCACACGGAAATCGCTATCATGCGCCGATTAAATCACCCCAACATCGTGAAACTCCACGAAGTAATGGCAACGAAGACCAAGATTTTCCTAGTCATGGAGCTAGCAAAAGGCGGCGAGCTCTATGACAAGATCGTGAACAACCACGTGTACCATGACGAAGATCAGAACCGTCGATGGTTCCATCAATTAATCTCAGCCGTCCAACATTGTCATTCACACGGCGTGTTTCACCGCGATTTGAAGTTAGACAACCTCCTCCTCGACGAGGATTTGAACATCAAGGTTTCGGATTTCGGGTTGAGTGCCACAACGGGTCATACCCGACCCGACGGAAAGCTCCATACTCTATGTGGGACCCCGGCTTATTTAACCCCTGAGATGCTCGCAGGGAAAGGATACTACGGAGATAAAGTTGATGTGTGGCAATGCGGTGTCGTTTTGTATGTTCTCACATTTCTTTCTCTGCCGTTTGGTGGGCCCAATGTGCAGGCCCAATTGAGGAGAATCCGGCGGGGCGAAGTTCGGATCCCCCGATGGGCCAAACCCGACTTGAGGAATTTACTCAAGCGGTTGCTTGACCCGAACCCGAATACCCGGATTACGATCCATGAGATTATGGAGGATCCTTGGTTTAGAAAAGGGTATACAGAAATTAAAGTTTGTCAGAGGAAGAATCTAGAATGGGAAGATGAGGATGGGCCCAAATCATTGAATGCTTTTCATTTAATATCTTTATCTTCGGGTTTGGATATGTCGGGTATGTTTGGTTGTGACCCGGATCCGGAATTTTCGGGTCGGGTGAAACGCGTCGTTTCGAGGGAGATGCCGGAGAGGATTGTGGAGGTGGTGGAGGAGGCAGCTGATCGGAAAATAGTGACGGTGGTTAGAAAGGAGGATGATTGTGGGGTGAAGTTTGAGGGGCAAAGTGGTAATTTTGTGGTATTGATTTGTGTTTACCGGCTAACGGATGAGCTGGTTTTGGTTGAGGTGAAGATGAAGGGAAAGGATGATAGAGTTGGCGCACAATTTTGGAAAGATAAATTGTGGCCTCGAATTTTAGAATTAGAGTATAAACCGGAATAG 1344 0.4635 MFQTIRQLHRDIDAEESALESTSPAKDDELELEINGVLFEKYKICRLLGVGGFAKVYEATNVLSKQIVAIKVVSKRTIRERGLTAQVHTEIAIMRRLNHPNIVKLHEVMATKTKIFLVMELAKGGELYDKIVNNHVYHDEDQNRRWFHQLISAVQHCHSHGVFHRDLKLDNLLLDEDLNIKVSDFGLSATTGHTRPDGKLHTLCGTPAYLTPEMLAGKGYYGDKVDVWQCGVVLYVLTFLSLPFGGPNVQAQLRRIRRGEVRIPRWAKPDLRNLLKRLLDPNPNTRITIHEIMEDPWFRKGYTEIKVCQRKNLEWEDEDGPKSLNAFHLISLSSGLDMSGMFGCDPDPEFSGRVKRVVSREMPERIVEVVEEAADRKIVTVVRKEDDCGVKFEGQSGNFVVLICVYRLTDELVLVEVKMKGKDDRVGAQFWKDKLWPRILELEYKPE 447
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi11g0346 447 ProSiteProfiles NAF domain profile. 319 343 IPR018451 GO:0007165
Mibi11g0346 447 Pfam NAF domain 321 377 IPR004041 GO:0007165
Mibi11g0346 447 CDD CIPK_C 325 435 - -
Mibi11g0346 447 Pfam Protein kinase domain 42 298 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi11g0346 447 ProSiteProfiles Protein kinase domain profile. 42 298 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi11g0346 447 PANTHER CALCIUM/CALMODULIN-DEPENDENT PROTEIN KINASE KINASE-RELATED 35 418 - -
Mibi11g0346 447 FunFam Maternal embryonic leucine zipper kinase 34 341 - -
Mibi11g0346 447 SUPERFAMILY Protein kinase-like (PK-like) 38 309 IPR011009 -
Mibi11g0346 447 Gene3D Transferase(Phosphotransferase) domain 1 125 323 - -
Mibi11g0346 447 Gene3D Kinase associated domain 1, KA1 324 444 - -
Mibi11g0346 447 FunFam Aurora kinase A 35 125 - -
Mibi11g0346 447 Gene3D Phosphorylase Kinase; domain 1 38 124 - -
Mibi11g0346 447 SMART serkin_6 42 298 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi11g0346 447 ProSitePatterns Serine/Threonine protein kinases active-site signature. 162 174 IPR008271 GO:0004672|GO:0006468
Mibi11g0346 447 ProSitePatterns Protein kinases ATP-binding region signature. 48 71 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi11g0346 Mibi-ChrMibi11 5573119 5574462 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi11g0346 35 435 CBL-interacting serine-threonine protein kinases AT2G30360 51.825 9.11e-139 403
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Mibi11g0346 Pkinase 4.9e-67 CL0016