Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi11g0343 ATGGAACCAAAAAGTGTGCTTATGCAGCGGTATGAACTGGGGAGATTATTAGGCCAAGGAACCTTTGCAAAGGTCTACTATGCAAGGAACCTTGTTACTGGCTTGAGTGTGGCCATTAAGATGATTGATAAAGAGAAGATTTTGAAAGTTGGGATGATTGATCAAATTAAAAGGGAAATTTCAGTTATGAGACTTGTTAGGCATCCACATGTGGTTGAGCTTTACGAGGTAATGGCCACTAAAACCAAGATTTACTTTGTCATGGAGTATGCAAAGGGCGGTGAACTCTTCCATAAGGTGGCCAAAGGAAAGCTGAAGGAGGATATCGCCAGGAAATACTTTCAGCAACTGATCAGTGCCGTTGACTACTGCCACAGCAGAGTAGTGTCTCATCGGGATCTGAAGCCCGAAAATCTGCTGTTAGACGAAAATGGGAATCTGAAGGTTTCAGACTTTGGGTTAAGTGCTCTTGCTGAGTCTAAGCGTCAGGATGGCTTACTCCATACTACATGTGGTACCCCAGCCTATGTTGCTCCAGAAGTGATAAACAGAAAAGGCTATGATGGGCCAAAAGCTGATATATGGTCATGTGGGGTGATCTTGTATGTTTTATTGGCTGGTTATCTTCCATTCCGTAATTCCAATCTGATGGAGATGTATAAGAAGATTGGTAAAGGGGAGTTCAAATTCCCTAATTGGTTTTCATCAGATGTACGCCGGTTGTTGTCCAGAATCTTGGATCCTAATCCAAACACCCGGATATCGATAGCCCAAATTATGGAAAGTTCTTGGTTCAAAAAGGGATTAGAGCAGAATGTTGTTTCAGAGACTGCAGAGAAAGATCTTGCTCCTTTGGATGCCGATGGTGTATTTGGATCTTGTGAGAATAACAGTGGTCCTGTTGCAGAGGCAAAACAAGAACTCACCAAACCTTGTAATATGAATGCCTTCGATATCATTTCCTTGTCTGCAGGTTTTGACTTGTCTGGTCTGTTTGAGGAGACCGATAGGAAAAGAGAGGCGCGGTTCACATCAAACAAGCCTTCTGCGATTATCATCTCTAAGTTGGAAGAAATTTGTAAGCGCCTCCGGCTGAAAGTGAAGAAGATAGAAGGTGGGTTATTCAAATTGGAGGGCTCCAAGGAAGGCAGAAAAGGCGCTTTGGGTATTGACACCGAAATCTTTGAGATCACCCCACTCTTCCATATGGTGGAGCTTAAGAAGTCGAATGGCGACACGTTGGAATACCAGAAGCTTCTGAAAGAGGAGATCAGACCAGCACTTAAGGACATAGTCTGGAACTGGCAAGGAGAACAACCTCAGCAACTCCAGCTGTTGGAGCAGCAGCCTATACAATCAACTTCATGA 1368 0.4371 MEPKSVLMQRYELGRLLGQGTFAKVYYARNLVTGLSVAIKMIDKEKILKVGMIDQIKREISVMRLVRHPHVVELYEVMATKTKIYFVMEYAKGGELFHKVAKGKLKEDIARKYFQQLISAVDYCHSRVVSHRDLKPENLLLDENGNLKVSDFGLSALAESKRQDGLLHTTCGTPAYVAPEVINRKGYDGPKADIWSCGVILYVLLAGYLPFRNSNLMEMYKKIGKGEFKFPNWFSSDVRRLLSRILDPNPNTRISIAQIMESSWFKKGLEQNVVSETAEKDLAPLDADGVFGSCENNSGPVAEAKQELTKPCNMNAFDIISLSAGFDLSGLFEETDRKREARFTSNKPSAIIISKLEEICKRLRLKVKKIEGGLFKLEGSKEGRKGALGIDTEIFEITPLFHMVELKKSNGDTLEYQKLLKEEIRPALKDIVWNWQGEQPQQLQLLEQQPIQSTS 455
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi11g0343 455 Gene3D Kinase associated domain 1, KA1 309 434 - -
Mibi11g0343 455 ProSitePatterns Serine/Threonine protein kinases active-site signature. 129 141 IPR008271 GO:0004672|GO:0006468
Mibi11g0343 455 FunFam Non-specific serine/threonine protein kinase 309 433 - -
Mibi11g0343 455 Pfam NAF domain 311 369 IPR004041 GO:0007165
Mibi11g0343 455 ProSitePatterns Protein kinases ATP-binding region signature. 17 40 IPR017441 GO:0005524
Mibi11g0343 455 Gene3D Phosphorylase Kinase; domain 1 2 90 - -
Mibi11g0343 455 ProSiteProfiles NAF domain profile. 309 333 IPR018451 GO:0007165
Mibi11g0343 455 PANTHER CALCIUM/CALMODULIN-DEPENDENT PROTEIN KINASE KINASE-RELATED 4 430 - -
Mibi11g0343 455 Pfam Protein kinase domain 11 265 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi11g0343 455 SMART serkin_6 11 265 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi11g0343 455 Gene3D Transferase(Phosphotransferase) domain 1 91 291 - -
Mibi11g0343 455 CDD STKc_SnRK3 10 264 - -
Mibi11g0343 455 CDD CIPK_C 315 429 - -
Mibi11g0343 455 ProSiteProfiles Protein kinase domain profile. 11 265 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi11g0343 455 FunFam Non-specific serine/threonine protein kinase 2 90 - -
Mibi11g0343 455 FunFam Non-specific serine/threonine protein kinase 1 286 - -
Mibi11g0343 455 SUPERFAMILY Protein kinase-like (PK-like) 7 274 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi11g0343 Mibi-ChrMibi11 5480698 5482065 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi11g0343 1 441 CBL-interacting serine-threonine protein kinases AT5G58380 67.912 0.0 636
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Mibi11g0343 Pkinase 3.3e-76 CL0016