Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi11g0335 ATGTCTGGTCTTAATCTTAATTTTAATCTCAAACTGAGCATTTTCTTGTTATTGTCTTGTATTATTGGGATTAATAATGTTTCAGCTCAGTTGTCTTCCACTTTTTACGCCAAAACTTGCCCCCCAGCTCTTGCTCTCATTAAATCTTCAGTACTCTCTGCTGTTACTCAAGAGGCTCGCATGGGTGCATCCCTTCTTCGTCTTCATTTCCATGATTGCTTCGTTCAAGGATGTGATGCATCTGTACTTTTGGACGATACATCGAGTTTCACAGGAGAGAAGACAGCCTTTCCAAACGTTGGCTCTCTCCGAGGCTTCGACGTAGTCGACGCCATTAAATCGAAGCTCGAGACTACTTGCCCCGGTGTTGTCTCCTGCGCCGATATCGTCACCGTTGCTGCCAGAGACTCTGTCGTTGCTCTAGGTGGACCCAGTTGGCCGGTTCTATTGGGAAGAAGAGATTCAACTACAGCAAGTTTAAGTTCTGCTAACTCAGACTTGCCAGCTCCATTCTTAGATCTTAATGCTCTTATCACTGCTTTCTCTAACAAGGGTTTTACCGCTAAAGAAATGGTTGCACTCTCAGGAGCTCACACAATAGGGAAAGCACAATGTACCAACTTCAGAGCGAGGATTTACAATGAGACCAACATCGATCCCGTGTTCGCAAAAACCTTACAAGGAAATTGTCCGAGCGCAGGTGGCGACTCCAACTTATCAAATTTCGATGTGACAACTCCGAACTTGTTCGACAACGCTTACTTCAAGAACTTGATGAGCAATAAGGGCTTGTTGCATTCTGACCAACAGCTTTTCAATGGGGGATCAACAGATTCTCAAGTTACTGCTTATAAGAACAACCTTGCAAGTTTCAGAGCTGACTTTGCCAATGCTATGATTAAAATGGGAAACCTTAACCTTCTCACTGGATCCAACGGTCAGATTAGGACCAATTGTAGAAAAGTCAATTGA 972 0.4383 MSGLNLNFNLKLSIFLLLSCIIGINNVSAQLSSTFYAKTCPPALALIKSSVLSAVTQEARMGASLLRLHFHDCFVQGCDASVLLDDTSSFTGEKTAFPNVGSLRGFDVVDAIKSKLETTCPGVVSCADIVTVAARDSVVALGGPSWPVLLGRRDSTTASLSSANSDLPAPFLDLNALITAFSNKGFTAKEMVALSGAHTIGKAQCTNFRARIYNETNIDPVFAKTLQGNCPSAGGDSNLSNFDVTTPNLFDNAYFKNLMSNKGLLHSDQQLFNGGSTDSQVTAYKNNLASFRADFANAMIKMGNLNLLTGSNGQIRTNCRKVN 323
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi11g0335 323 FunFam Peroxidase 168 302 - -
Mibi11g0335 323 PRINTS Plant peroxidase signature 64 84 IPR000823 GO:0004601|GO:0006979|GO:0020037
Mibi11g0335 323 PRINTS Plant peroxidase signature 297 310 IPR000823 GO:0004601|GO:0006979|GO:0020037
Mibi11g0335 323 PRINTS Plant peroxidase signature 123 133 IPR000823 GO:0004601|GO:0006979|GO:0020037
Mibi11g0335 323 PRINTS Plant peroxidase signature 241 256 IPR000823 GO:0004601|GO:0006979|GO:0020037
Mibi11g0335 323 PRINTS Plant peroxidase signature 40 59 IPR000823 GO:0004601|GO:0006979|GO:0020037
Mibi11g0335 323 PRINTS Plant peroxidase signature 257 274 IPR000823 GO:0004601|GO:0006979|GO:0020037
Mibi11g0335 323 PRINTS Plant peroxidase signature 142 157 IPR000823 GO:0004601|GO:0006979|GO:0020037
Mibi11g0335 323 PRINTS Plant peroxidase signature 189 201 IPR000823 GO:0004601|GO:0006979|GO:0020037
Mibi11g0335 323 PRINTS Plant peroxidase signature 104 117 IPR000823 GO:0004601|GO:0006979|GO:0020037
Mibi11g0335 323 Pfam Peroxidase 49 287 IPR002016 GO:0004601|GO:0006979|GO:0020037
Mibi11g0335 323 Gene3D Peroxidase, domain 2 168 302 - -
Mibi11g0335 323 FunFam Peroxidase 34 171 - -
Mibi11g0335 323 ProSiteProfiles Plant heme peroxidase family profile. 30 323 IPR002016 GO:0004601|GO:0006979|GO:0020037
Mibi11g0335 323 ProSitePatterns Peroxidases active site signature. 62 73 IPR019794 GO:0004601
Mibi11g0335 323 PANTHER PEROXIDASE 72-RELATED 27 322 IPR000823 GO:0004601|GO:0006979|GO:0020037
Mibi11g0335 323 ProSitePatterns Peroxidases proximal heme-ligand signature. 190 200 IPR019793 -
Mibi11g0335 323 PRINTS Haem peroxidase superfamily signature 190 205 IPR002016 GO:0004601|GO:0006979|GO:0020037
Mibi11g0335 323 PRINTS Haem peroxidase superfamily signature 142 154 IPR002016 GO:0004601|GO:0006979|GO:0020037
Mibi11g0335 323 PRINTS Haem peroxidase superfamily signature 243 258 IPR002016 GO:0004601|GO:0006979|GO:0020037
Mibi11g0335 323 PRINTS Haem peroxidase superfamily signature 62 76 IPR002016 GO:0004601|GO:0006979|GO:0020037
Mibi11g0335 323 PRINTS Haem peroxidase superfamily signature 124 141 IPR002016 GO:0004601|GO:0006979|GO:0020037
Mibi11g0335 323 CDD secretory_peroxidase 30 322 IPR033905 GO:0004601|GO:0042744
Mibi11g0335 323 Gene3D - 34 320 - -
Mibi11g0335 323 SUPERFAMILY Heme-dependent peroxidases 30 323 IPR010255 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi11g0335 Mibi-ChrMibi11 5356597 5358519 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi11g0335 23 323 Peroxidase AT5G05340 62.623 1.81e-136 388