Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi11g0308 ATGTCTTTGGAACAAGTTCAACTGAGTTTATCTTCAACAGTATACTTCTTCCAAGTTTCTTCTCCTTCCACCTTCTCCCTTTATATTCACAAACAACCTCCCTCTTTTGAATTCAAACCCCATAACCCAAAAATCAAATCTTTATACTTCCTCCTCTCTCTCTCTCTCTCTCGTTTCATGACTACCTCCTTCACAGAACTCCTTTCCATGGACGATCGTTCCTGGCCTTCTTCTTCTCCTTCCTCTGAAATCCCTAAATTCAAGTCCACCCCACCTCCTTCTTTGCCCCTTTCTCCTTGCCCTCTTTCTCCTTCTTCTTACTTGGCTTTCTCTTCTGGGTTTAGCCCCACTCAGTTTTTGGCCTCTCCCTTGTTCCATTCTTCCCCAAATGTTTTTACTTCTATTGAGACGTTTAATAACAAGGAGGAGGAGCAGAAACCTTTCTTCGACTTCTCCTTCCAAACCCAATCCAAGCCGTCGTCTTTCTTAGAATATTCTTCAACCATGTTTCAATCGGAACCACTGAAACAAGAGCCGTGGAATGAGAAGGCTGCTACAAAATCTGAGTATCCATCAACTCAGAGCTTCTCCTCAGAACCACAGATACAAAGCAATAATCATATTGCTCCTGCATCTTCTGGTTATACTAATTACTCAAATTCGTCCCAATCTGTAAGAGAGCAAAAGAGGACAGATGATGGGTATAACTGGAGAAAATATGGGCAGAAACAAGTGAAGGCGAGCGAAAATCCTCGCAGTTATTACAAGTGCACTCATCCGAGTTGCAACATGAAGAAGAAGGTTGAGAAGTCTCTGGATGGACAAATCACTGAGATAGTATACAAGGGAACACATAACCATCCCAAGCCTCAGTCCACCAGGAGATCTAGCTCTCAATCAATTCAACCTTCTTCCTCTTGTACCAATTCCGGGATTTCTGACCAATCCGCTGTGACCCTGGGGAATCTGCAAATGGAGCCATCCTCTTTGCAGGAAGATTCTTCTGTATCTGTTGGAGAAGATGACTTTGAGCACACATCACAAACTTGTTACTCTGGGGCTGATGACAATGACTATGGCCCTGATGCCAAAAGATGGAAAGGGGATAATGAAATTGATGGCTATGCCAACTCTGGGAATAGAACTGTGAGGGAACCAAGAGTTGTGGTTCAAACTACAAGTGAAATTGATATTCTTGATGATGGCTATAGATGGAGGAAATATGGTCAAAAAGTAGTTAAAGGGAATCCAAACCCAAGGAGTTACTACAAGTGTACGGCTCCAGGATGTTCAGTGAGGAAACATATTGAGCGAGCCGCCCATGACATGAAAGCTGTGATCACAACATACGAAGGGAAACACAACCATGATGTTCCTGCAGCACGAGGGAGCGGGGGTTATAATATGAATGCGGCTTCTCTGAACAGCAGCAACCCCTCCGCCGGAAACAATGTAACCGCTCCTATAAGGCCGTCGGCTTCTTCGGCATTGACCGGCTATCCCAGCAAACAAGGCTTCACGAATTCGCTTCAGAACTCAAGCCAACAACTAACATCTGCAAGTCAAGAACCATTCCCATTTGACATGTTGCAGAGTCCAGCAAGTTTTGCATACTCAGATTTTGTTAGATCAATGGGATCATATAACCCTAATGCATAA 1659 0.4388 MSLEQVQLSLSSTVYFFQVSSPSTFSLYIHKQPPSFEFKPHNPKIKSLYFLLSLSLSRFMTTSFTELLSMDDRSWPSSSPSSEIPKFKSTPPPSLPLSPCPLSPSSYLAFSSGFSPTQFLASPLFHSSPNVFTSIETFNNKEEEQKPFFDFSFQTQSKPSSFLEYSSTMFQSEPLKQEPWNEKAATKSEYPSTQSFSSEPQIQSNNHIAPASSGYTNYSNSSQSVREQKRTDDGYNWRKYGQKQVKASENPRSYYKCTHPSCNMKKKVEKSLDGQITEIVYKGTHNHPKPQSTRRSSSQSIQPSSSCTNSGISDQSAVTLGNLQMEPSSLQEDSSVSVGEDDFEHTSQTCYSGADDNDYGPDAKRWKGDNEIDGYANSGNRTVREPRVVVQTTSEIDILDDGYRWRKYGQKVVKGNPNPRSYYKCTAPGCSVRKHIERAAHDMKAVITTYEGKHNHDVPAARGSGGYNMNAASLNSSNPSAGNNVTAPIRPSASSALTGYPSKQGFTNSLQNSSQQLTSASQEPFPFDMLQSPASFAYSDFVRSMGSYNPNA 552
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi11g0308 552 MobiDBLite consensus disorder prediction 186 225 - -
Mibi11g0308 552 ProSiteProfiles WRKY domain profile. 226 290 IPR003657 GO:0003700|GO:0006355|GO:0043565
Mibi11g0308 552 Gene3D WRKY domain 386 452 IPR036576 GO:0003700|GO:0006355|GO:0043565
Mibi11g0308 552 FunFam WRKY transcription factor 33 386 452 - -
Mibi11g0308 552 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 122 484 IPR044810 GO:0003700
Mibi11g0308 552 MobiDBLite consensus disorder prediction 326 357 - -
Mibi11g0308 552 MobiDBLite consensus disorder prediction 471 525 - -
Mibi11g0308 552 MobiDBLite consensus disorder prediction 176 259 - -
Mibi11g0308 552 MobiDBLite consensus disorder prediction 286 314 - -
Mibi11g0308 552 SUPERFAMILY WRKY DNA-binding domain 391 459 IPR036576 GO:0003700|GO:0006355|GO:0043565
Mibi11g0308 552 MobiDBLite consensus disorder prediction 326 354 - -
Mibi11g0308 552 SUPERFAMILY WRKY DNA-binding domain 227 290 IPR036576 GO:0003700|GO:0006355|GO:0043565
Mibi11g0308 552 FunFam WRKY transcription factor 220 291 - -
Mibi11g0308 552 Gene3D WRKY domain 216 291 IPR036576 GO:0003700|GO:0006355|GO:0043565
Mibi11g0308 552 ProSiteProfiles WRKY domain profile. 394 459 IPR003657 GO:0003700|GO:0006355|GO:0043565
Mibi11g0308 552 MobiDBLite consensus disorder prediction 74 93 - -
Mibi11g0308 552 MobiDBLite consensus disorder prediction 282 314 - -
Mibi11g0308 552 Pfam WRKY DNA -binding domain 232 288 IPR003657 GO:0003700|GO:0006355|GO:0043565
Mibi11g0308 552 Pfam WRKY DNA -binding domain 400 456 IPR003657 GO:0003700|GO:0006355|GO:0043565
Mibi11g0308 552 SMART WRKY_cls 399 458 IPR003657 GO:0003700|GO:0006355|GO:0043565
Mibi11g0308 552 SMART WRKY_cls 231 289 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi11g0308 Mibi-ChrMibi11 4756081 4762914 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi11g0308 226 531 WRKY Transcription Factor Family AT2G38470 57.911 2.89e-108 332
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Mibi11g0308 WRKY 2.7e-24 CL0274
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi11g0308 11 4756081 4762914 Mibi11g0308 11 4756081 4762914 ECH