Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi11g0303 ATGGGGAATTGTTGTAGTAGTAATGTTCCTCGTCCATATTCAATGGAAAATGAAATGAATGAGACAGAATTTGAGCATGGTGAGGACATTAATTCCATTTCCCCTTATAGTGAAGGTGAAGAGCGTGTCAGGCTCAGACGACGCTCTAGGCTTGTTTCTATGTACAAACAGCAGGGAAGAAAAGGAGTCAATCAGGATGCATTAACAGTTTGTGAGGACTTCAATGGAGAAAAAGACATGATGTTTTGTGGTGTGTTCGATGGTCATGGTCCTTTTGGGCACGTGGTTGCTCGATATGTAAGCAAAAGTTTACCCTCAAAGCTCTCTGCAGCAATCAAAATGTCACAGCAAAAGACCTTCATGTATAATGCTGCATCAGAAGGTGAATACCACCAAGCTTTGTCCCTTGCTTCATGGGAGAACATCTTCTTGAAATCCTTCAGCGACATGGATCACTCCATTGCTCGGGACGTCAACACCGACAGTTTTTACAGCGGCAGCACTGCTGTAACTCTAATCAAACAGGGTGACCATTTGATAATTGGCAATGTGGGTGATTCTCGTGCGGTTCTTTGCACAAAAGCTAGAGATCAACTCATTCCTGTTCAACTTACTGTTGACCTGAAGCCAGATATTCCAAGTGAGCCTTCTACATTGTGTCCTTTAAATCCCCTTGATACTGATAAGCACTTGGATATGTCTGACAAACTTTTTCCTTTTCTGCTTGAATGTCACTACTCATCAGGTGAAGCCGAAAGAATCCATAGCTGTGAAGGCAGAGTTTTTGCTGAAGAAGAAGAGCCTGATGTGTACAGAATGTGGATGCCTGATGAAGACTGCCCTGGATTGGCTATGTCAAGAGCCTTTGGAGATTTCTGCTTAAAAGATTATGGTCTCATCTCAGCTCCTGATGTATTCTATCGAAGATTAACCAAGCAGGATCAATTTGTGGTTCTGGCTACTGACGGGGTTTGGGATGTACTGACAAATGAGGAAGTTATAGAAATAGTTGCTTCAGCATCAAGGAGGTCCAGAGCAGCAAGATTGTTGGTAAAGAGAGCTGTGCAGGCATGGGGCTATAAATTTCCTGGTGCCAAGGTTGATGATTGTGCAGCCATATGTTTGTTTCTAAAGAGAGACGACCAACAAGACATAACCAAATCTGGGGAACATAGGCTCAAAAAGATGAACTATTACTATGAATCTGCTAGAAATGAAGACACCAGAGGCTTAGATAGCCCAGTGTCAAAAGATGAGTGGGTAGCAGCTCAAAAAGGGTTATTCAGAGCCAACACTTTATCCAAAATTACTGGTCTCTTCAGAGATGTGAGCAGGAGGCATCCATCTCAGTTTCTTGAGGGTGTTCAACTTCACTAG 1377 0.4292 MGNCCSSNVPRPYSMENEMNETEFEHGEDINSISPYSEGEERVRLRRRSRLVSMYKQQGRKGVNQDALTVCEDFNGEKDMMFCGVFDGHGPFGHVVARYVSKSLPSKLSAAIKMSQQKTFMYNAASEGEYHQALSLASWENIFLKSFSDMDHSIARDVNTDSFYSGSTAVTLIKQGDHLIIGNVGDSRAVLCTKARDQLIPVQLTVDLKPDIPSEPSTLCPLNPLDTDKHLDMSDKLFPFLLECHYSSGEAERIHSCEGRVFAEEEEPDVYRMWMPDEDCPGLAMSRAFGDFCLKDYGLISAPDVFYRRLTKQDQFVVLATDGVWDVLTNEEVIEIVASASRRSRAARLLVKRAVQAWGYKFPGAKVDDCAAICLFLKRDDQQDITKSGEHRLKKMNYYYESARNEDTRGLDSPVSKDEWVAAQKGLFRANTLSKITGLFRDVSRRHPSQFLEGVQLH 458
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi11g0303 458 Pfam Protein phosphatase 2C 57 215 IPR001932 -
Mibi11g0303 458 Pfam Protein phosphatase 2C 247 355 IPR001932 -
Mibi11g0303 458 Gene3D - 40 381 IPR036457 -
Mibi11g0303 458 CDD PP2Cc 57 377 IPR001932 -
Mibi11g0303 458 SUPERFAMILY PP2C-like 49 378 IPR036457 -
Mibi11g0303 458 ProSiteProfiles PPM-type phosphatase domain profile. 51 377 IPR001932 -
Mibi11g0303 458 PANTHER PROTEIN PHOSPHATASE 50 375 - -
Mibi11g0303 458 SMART PP2C_4 41 375 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi11g0303 Mibi-ChrMibi11 4707488 4710128 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi11g0303 1 377 PP2C-type Phosphatase Gene Family AT5G01700 46.615 1.08e-113 338
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi11g0303 11 4707488 4710128 Mibi04g2100 04 52553560 52558986 CCT
Mibi11g0303 11 4707488 4710128 Mibi11g0303 11 4707488 4710128 ECH