Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi11g0287 ATGGCTGAAAAATGGAAGAAAGGATGTATTAAGATTACTAAGGGGCCTTGGATAGTGAAGAAAGTTACTAAGGATGGTTTTGTTAAACAGACTCATCGGTTTCCAAGTGAGCGAGAGAGACAAAAGAATAAGATTAGAGAGAGGAACCGAAGAGCGATGACCCGGAAAATATTTTCTGGTTTGAGAGCTCATGGGAACTATATTCTTCCCAAACATTCAGACACTAATGATTTACTCATGGCACTGTGTGAAGAAGCTGGTTGGCATGTTGAAGAAGATGGAACCATCTATAGAAAGAAAAAGGATTTAAATTCAGCTGACAAGAAGACTCAAACAAATGTTACTAATGCTGGGGTGAAAAATGAATACGTCCAATGCAGTAAAGGTTGGCAACAAAATTGGTTGGTTGGGGGGTCTGAAACCAATCTTAACCTTACACTTTCACTTTAG 450 0.3889 MAEKWKKGCIKITKGPWIVKKVTKDGFVKQTHRFPSERERQKNKIRERNRRAMTRKIFSGLRAHGNYILPKHSDTNDLLMALCEEAGWHVEEDGTIYRKKKDLNSADKKTQTNVTNAGVKNEYVQCSKGWQQNWLVGGSETNLNLTLSL 149
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi11g0287 149 Pfam BES1/BZR1 plant transcription factor, N-terminal 32 113 IPR008540 -
Mibi11g0287 149 PANTHER BES1/BZR1 HOMOLOG PROTEIN 3-RELATED 30 103 IPR033264 GO:0003700|GO:0006351|GO:0009742
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi11g0287 Mibi-ChrMibi11 4540350 4541137 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi11g0287 52 115 BZR Transcription Factor Family AT4G36780 58.462 2.13e-18 77.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF BES1 Mibi11g0287 BES1_N 3.9e-34 No_clan