Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi11g0285 ATGAACACTATTTCCCTTTTCTTCTTGTTACTGTTCCTTCTTCTTCTTCCTCTTTTTTCTTCCTCTCTCTCCCCCGACGGCCTCGCCCTCCTCTCCCTAAAATCCGCCATAGACCAACCACCAGGCGCCGCCGCATTCCCCGACTGGAACGACGGCGACCCAAACCCATGTCACTGGTCAGGAATCTCCTGCGCCAACGTCTCCACGTCATCATCAGACCCTCGCGTCGTCGGAATCACACTCTCCGGTAGAAATCTCAAAGGCTACATCCCCTCCGAACTCGGAACCCTAGAATACCTCCGTAGGCTCAATCTCCACAGCAACAATTTCTATGGCTTCATTCCTGTTCAACTCTTCAATGCCACGTCACTACATAGTCTCTTCCTCTATGGTAACAATCTCTCTGGCCCTTTACCTCCTTCGATCTGTAACATCCCTCGGTTACAAAACGTTGATTTGTCTAATAACTCCATTTCTGGTGAGATTCCTGTCGAGATTAGGAATTGTAAGCAGTTACAGAGGTTGAACCTCGCGAGGAATAGGTTTAATGGTGAGATTCCTAAGGGTGTGTGGTCGGATTTGGAGAATTTGGTTCAATTGGACCTTTCAGCTAACGAGCTTGAAGGTCCGATTCCGGAGGATGTTGGAGAATTGAAGTCTCTCTCTGGTACGCTTAATCTCTCGTTTAATCATTTGTCTGGTAAGATTCCGAAATCGCTTGGGAGTTTGCCGGTTGCTGTGAGTTTTGATCTGAGGGGTAATAATCTAAGTGGTGAGATTCCTCAAACTGGGTCGTTTGCTAATCAAGGTCCCACTGCATTTCTGGGGAATCCACTGTTATGTGGGTTTCCACTACAGAAATCTTGCGGGAATTCGAATCAGGGCTCGTCGGGGAGTAATTCGGGTTCGTCATCGAGAGATAATGATAGCCATTCTTCGAATGGTTTAAGTCCTGGTTTGATTATACTGATTTCAGCTGCTGATGCTGCTGCTGTTGCTTTGATTGGACTTGTGGTTGTGTATGTTTATTGGAAGAAGAAGGATGATTCCAATGGGTGTAGCTGTACAGGGAAGAGGAAGTTTGGTGGGAATGAGAAAGGGAATGTTTGTTCTTCATTCCCTTGTATCAATGGTTTGAAAAGTGATGATTCTGAGATTGAGGAGCCTGAGAAGGGAGAGGAGAGTAGAGGGGAAGGGGATTTGGTGGCAATTGATAAGGGTTTCAACTTTGAGCTTGATGAGCTTCTACGTGCTTCAGCTTATGTGTTGGGAAAGAGTGGGTTGGGGATTGTGTATAAAGTGGTTCTTGGAAATGGGATTCCTGTGGCTGTTAGAAGACTTGGAGAAGGTGGTGAACAGAGGTATAAGGAGTTTGCTGCTGAGGTTCAGGCCATTGGGAAAGTGAAGCATCCTAATATTGTGAAGTTGAAAGCTTATTATTGGGCTCCTGATGAGAAGCTTCTGATAAGTGATTTCATCTCCAATGGCAATCTGGCCACTGCTCTTCGAGGCAGAAATGGTCAACCATCTCCGAACCTTTCATGGTCAACCAGGCTAAGAATTGCCAAAGGAACAGCCAGGGGCTTGGCCTATCTCCATGAATGCAGTCCAAGAAAGTTCGTTCATGGCGATTTAAAACCCTCTAACATTCTACTTGACAATGACTTTCACCCTTACATATCTGATTTTGGCCTCAATCGCCTCATTACCATTACCGGAAACAACCCTTCATCTGGCGGCTTCATGGGTGGAGCTATTCCATACATGAAACCATCTCAAACAGAGAAAACCAACAATTACAAGGCCCCTGAAGCTAGAGTCCCTGGCTGTAGACCAACCCAGAAATGGGACGTCTATTCATTCGGAGTCGTATTGCTTGAACTTCTCACAGGGAAATCTCCAGAGTCATCTCCCACAACATCAACTTCTGTGGAAGTTCCTGACTTGGTGAGGTGGGTGAAGAAAGGGTTTGAAGAAGAAAGTCCATTATCAGAAATGGTTGATCCATCTCTGCTCCAAGAAGTTCATGCCAAGAAAGAGGTTCTAGCTGTGTTTCATGTAGCACTAGCTTGCACTGAGGGAGATCCTGAGGTTCGGCCTAGAATGAAATCTGTCTCTGAAAGTCTTGAAAGGGTTGGAACATGA 2145 0.4601 MNTISLFFLLLFLLLLPLFSSSLSPDGLALLSLKSAIDQPPGAAAFPDWNDGDPNPCHWSGISCANVSTSSSDPRVVGITLSGRNLKGYIPSELGTLEYLRRLNLHSNNFYGFIPVQLFNATSLHSLFLYGNNLSGPLPPSICNIPRLQNVDLSNNSISGEIPVEIRNCKQLQRLNLARNRFNGEIPKGVWSDLENLVQLDLSANELEGPIPEDVGELKSLSGTLNLSFNHLSGKIPKSLGSLPVAVSFDLRGNNLSGEIPQTGSFANQGPTAFLGNPLLCGFPLQKSCGNSNQGSSGSNSGSSSRDNDSHSSNGLSPGLIILISAADAAAVALIGLVVVYVYWKKKDDSNGCSCTGKRKFGGNEKGNVCSSFPCINGLKSDDSEIEEPEKGEESRGEGDLVAIDKGFNFELDELLRASAYVLGKSGLGIVYKVVLGNGIPVAVRRLGEGGEQRYKEFAAEVQAIGKVKHPNIVKLKAYYWAPDEKLLISDFISNGNLATALRGRNGQPSPNLSWSTRLRIAKGTARGLAYLHECSPRKFVHGDLKPSNILLDNDFHPYISDFGLNRLITITGNNPSSGGFMGGAIPYMKPSQTEKTNNYKAPEARVPGCRPTQKWDVYSFGVVLLELLTGKSPESSPTTSTSVEVPDLVRWVKKGFEEESPLSEMVDPSLLQEVHAKKEVLAVFHVALACTEGDPEVRPRMKSVSESLERVGT 714
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi11g0285 714 ProSitePatterns Serine/Threonine protein kinases active-site signature. 540 552 IPR008271 GO:0004672|GO:0006468
Mibi11g0285 714 SUPERFAMILY L domain-like 24 286 - -
Mibi11g0285 714 Gene3D Phosphorylase Kinase; domain 1 405 492 - -
Mibi11g0285 714 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 170 712 - -
Mibi11g0285 714 CDD STKc_IRAK 423 711 - -
Mibi11g0285 714 FunFam Leucine-rich repeat receptor-like protein kinase 196 291 - -
Mibi11g0285 714 Gene3D Transferase(Phosphotransferase) domain 1 493 712 - -
Mibi11g0285 714 FunFam Leucine-rich repeat receptor-like protein kinase 400 492 - -
Mibi11g0285 714 MobiDBLite consensus disorder prediction 292 312 - -
Mibi11g0285 714 ProSiteProfiles Protein kinase domain profile. 417 712 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi11g0285 714 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 23 192 - -
Mibi11g0285 714 Gene3D Ribonuclease Inhibitor 24 189 IPR032675 -
Mibi11g0285 714 SUPERFAMILY Protein kinase-like (PK-like) 422 709 IPR011009 -
Mibi11g0285 714 SMART serkin_6 421 712 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi11g0285 714 Pfam Leucine rich repeat N-terminal domain 24 64 IPR013210 -
Mibi11g0285 714 Pfam Protein kinase domain 422 648 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi11g0285 714 Pfam Leucine rich repeat 146 207 IPR001611 GO:0005515
Mibi11g0285 714 Gene3D Ribonuclease Inhibitor 190 290 IPR032675 -
Mibi11g0285 714 FunFam Os07g0541700 protein 498 579 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi11g0285 Mibi-ChrMibi11 4519152 4523472 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi11g0285 20 712 Receptor kinase-like Gene Family AT1G67510 70.663 0.0 994
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Mibi11g0285 Pkinase 5.2e-33 CL0016