Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi11g0282 ATGGGAAACAATAATCGGTTTTCCGACAAGTTTCCCACAAATGAAGGAAACCCCATGTCTCGTTTCTTTGTCTGCTTCTCTCTGGTTCTCCTTCAAGTTCTGGCTTTTACATTTCAACCAGTCTCAGGAGGAGGCCATTCTTGGGATGGTGTGATTGTTAGGCAAGCTGATTATCAAGCTCTAAGAGCTATAAAGCATGAATTTATTGATTCCAGAGGTGTTTTGAGAAGCTGGAATGACAGTGGAATTGGAGCTTGTTCTGGTGGATGGGCAGGTATCAAGTGTGTGAAGGGACAGGTTATTGCAATCCAGCTTCCATGGAGGGGATTGGGTGGTCGAATTTCTGAGAAAATTGGATCACTTCAGTCTCTTAGGAAGCTGAGTTTACATGACAATGTACTAGGTGGTCCTGTCCCTTGGTCTCTTGGCTTCCTTCCTAATATAAGAGGAATCTATCTCTTCAACAATAGGCTTTCAGGTTCTGTACCTCCTTCCATTGGCAGGAATAGCCCAATGCTTCAGTCTATTGATTTTAGCAATAATTCTCTCTCAGGTACTATCCCTCCTAGCTTAGCAAACTCTACTAGATTATATAGACTCAATTTGAGCTTTAACTCTTTTTCTGGGTCTATTCCGAGGACTTTCACTATGTCTCCTTCTTTAACTATTCTTGCTCTTCAACACAACAATCTTTCTGGTTCTATCCCAGATTCCTGGGGCAGTGGAATAATGGGAAATAACCAAACTTACAATCTTCAAATCTTGACACTTGATCACAATCTCATTTCTGGACCCATTCCTGTTTCTTTGGGTAAGATGGGTTATCTCCAAGAGATTTCTCTGAGCCATAACCAGATTAAAGGGCCTATTCCAATTGAGTTAGGTGGTCTTTCTAGGCTTCAAACTTTTGATCTATCAAATAATGGCATTAATGGTAGCTTTCCAGGTAATTTTGACCGGTTGAAAAACCTTGCTGTGCTTAACCTGAAGAATAATAAACTTGAGGGTGAGATCCCATCGACAATTGGGAACATAACAGGAATCAATCAGATTGATTTCTCTGATAATAAACTTGTCGGAGAGATTCCAGATTCATTTAACAAACTTGCAAATTTGACCTCTTTTAATGTTTCTTACAACAATCTGTCTGGCCTTGTCCCATCCCTCCTCTCCAAAAGATTCAATTCTAGCTCTTTTGCGGGGAATCTCCAACTCTGTGGGTTTATCCCATCAAAACCATGCCCTTCTTCTTCTTCACCCCCACCTCAGAATCCTCCATCTCCATCCCCAAAACCTTCACACCATCGAAAACTGAGCACCAAGGACATAATCCTTATAGTAGCAGGTGCTCTTCTTGTGATTCTTCTTCTACTTTGCTGCTTTTTGCTTTGTTGTTTGATCAGGAAAAAAGCAGCCTCTAAAGAAAAGAATGGGAATAATGCCAAAGCGTCATCCACTGCTGCTAGTACTGCAAGAGCAGGAAAAGGAGGTGAAGTTGAATCAGGAGGTGAAGCAGGAGGGAAGTTAGTTCACTTTGATGGGCCGTTTGTTTTCACAGCTGATGATCTCTTGTGTGCAACTGCTGAGATTATGGGGAAAAGTGCTTATGGAACAGCTTACAAGGCAACACTTGAGGATGGGAACCAGGTTGCTGTGAAGAGGCTGAGGGAGAAGACAACCAAAGGCCAGAAGGAGTTTGAAACTGAGGTTGCTGCACTTGGAAAAATTAGACACCCAAATCTGTTGGCACTTAGAGCATACTACTTGGGACCAAAGGGAGAGAAGCTTCTTGTCTTTGATTACATGAGCAAAGGAAGTCTAGCATCATTCCTCCACGCTAGGGGCCCGGAAATTGTCATAGATTGGCCAACAAGGATGAAAATAGCCATTGGAGTGACACGTGGACTATGCTACCTGCATACACAAGAGAACATCGTACATGGAAATCTAACTTCAAGCAACATACTCTTGGATGAGCAGACAAATGCCCATATCACAGACTTCGGTCTGTCAAGGCTAATGACCACTTCAGCAAACAGCAACATCATAGCCACAGCAGGAAACCTTGGTTATAATGCACCAGAGCTCACAAAGACCAAGAAACCTAACACAAAAACTGATGTCTATAGCCTTGGTGTCATCATTTTGGAGCTCTTAACTGGGAAACCACCTGGTGAACCTACCAATGGCTTGGACTTGCCACAATGGGTTGCATCTATAGTGAAGGAAGAATGGACTAATGAAGTGTTTGATTTGGAGCTCATGAGGGATGCACCAACTATAGGTGATGAACTGCTTAATACTCTGAAATTAGCTCTTCATTGTGTGGATCCATCCCCAGCTGCTAGGCCTGAAGTTCAGCAGATTCTTCAGCAACTGGAAGAGATCAAGCCAGATTCTTCAGTGGATGATGGAGCAAAAGTCCCTGAAGCTGAATAA 2439 0.4272 MGNNNRFSDKFPTNEGNPMSRFFVCFSLVLLQVLAFTFQPVSGGGHSWDGVIVRQADYQALRAIKHEFIDSRGVLRSWNDSGIGACSGGWAGIKCVKGQVIAIQLPWRGLGGRISEKIGSLQSLRKLSLHDNVLGGPVPWSLGFLPNIRGIYLFNNRLSGSVPPSIGRNSPMLQSIDFSNNSLSGTIPPSLANSTRLYRLNLSFNSFSGSIPRTFTMSPSLTILALQHNNLSGSIPDSWGSGIMGNNQTYNLQILTLDHNLISGPIPVSLGKMGYLQEISLSHNQIKGPIPIELGGLSRLQTFDLSNNGINGSFPGNFDRLKNLAVLNLKNNKLEGEIPSTIGNITGINQIDFSDNKLVGEIPDSFNKLANLTSFNVSYNNLSGLVPSLLSKRFNSSSFAGNLQLCGFIPSKPCPSSSSPPPQNPPSPSPKPSHHRKLSTKDIILIVAGALLVILLLLCCFLLCCLIRKKAASKEKNGNNAKASSTAASTARAGKGGEVESGGEAGGKLVHFDGPFVFTADDLLCATAEIMGKSAYGTAYKATLEDGNQVAVKRLREKTTKGQKEFETEVAALGKIRHPNLLALRAYYLGPKGEKLLVFDYMSKGSLASFLHARGPEIVIDWPTRMKIAIGVTRGLCYLHTQENIVHGNLTSSNILLDEQTNAHITDFGLSRLMTTSANSNIIATAGNLGYNAPELTKTKKPNTKTDVYSLGVIILELLTGKPPGEPTNGLDLPQWVASIVKEEWTNEVFDLELMRDAPTIGDELLNTLKLALHCVDPSPAARPEVQQILQQLEEIKPDSSVDDGAKVPEAE 812
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi11g0282 812 Pfam Leucine rich repeat N-terminal domain 55 95 IPR013210 -
Mibi11g0282 812 MobiDBLite consensus disorder prediction 414 432 - -
Mibi11g0282 812 Gene3D Ribonuclease Inhibitor 315 417 IPR032675 -
Mibi11g0282 812 Pfam Leucine rich repeat 251 310 IPR001611 GO:0005515
Mibi11g0282 812 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE IMK3-RELATED 250 796 - -
Mibi11g0282 812 Gene3D Transferase(Phosphotransferase) domain 1 603 808 - -
Mibi11g0282 812 SUPERFAMILY L domain-like 94 396 - -
Mibi11g0282 812 SMART LRR_typ_2 219 242 IPR003591 -
Mibi11g0282 812 SMART LRR_typ_2 369 392 IPR003591 -
Mibi11g0282 812 SMART LRR_typ_2 321 345 IPR003591 -
Mibi11g0282 812 SMART LRR_typ_2 145 169 IPR003591 -
Mibi11g0282 812 SMART LRR_typ_2 297 320 IPR003591 -
Mibi11g0282 812 ProSiteProfiles Protein kinase domain profile. 525 796 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi11g0282 812 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 241 418 - -
Mibi11g0282 812 MobiDBLite consensus disorder prediction 414 435 - -
Mibi11g0282 812 Gene3D Ribonuclease Inhibitor 214 314 IPR032675 -
Mibi11g0282 812 Gene3D Ribonuclease Inhibitor 54 213 IPR032675 -
Mibi11g0282 812 FunFam protein STRUBBELIG-RECEPTOR FAMILY 3 54 237 - -
Mibi11g0282 812 SUPERFAMILY Protein kinase-like (PK-like) 529 798 IPR011009 -
Mibi11g0282 812 MobiDBLite consensus disorder prediction 477 491 - -
Mibi11g0282 812 FunFam Leucine-rich repeat receptor-like protein kinase 511 601 - -
Mibi11g0282 812 Gene3D Phosphorylase Kinase; domain 1 531 602 - -
Mibi11g0282 812 CDD STKc_IRAK 531 796 - -
Mibi11g0282 812 Pfam Protein tyrosine and serine/threonine kinase 529 793 IPR001245 GO:0004672|GO:0006468
Mibi11g0282 812 FunFam Pollen receptor-like kinase 1 602 807 - -
Mibi11g0282 812 MobiDBLite consensus disorder prediction 476 502 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi11g0282 Mibi-ChrMibi11 4499260 4502123 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi11g0282 46 798 Receptor kinase-like Gene Family AT3G51740 66.154 0.0 986
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Mibi11g0282 PK_Tyr_Ser-Thr 5.3e-41 CL0016