Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi11g0273 ATGGCAAAGCGGCAGAAAACCTTCAAAGATTCTTCTCTCTTAGGGGTGAGTCTTCTTCTCTTGGTATTATTATGCCTTCACATTACAGCAAGAGCTTCAATGGTGGCCACAGATGAGGGGAATAGAAGACAAATACCTGTAGGAGTCATTCTTGATCTGAATTCAACACTTGGTTGCATAATTAACAACACCCTTGCTCTCGCCATCGAAGATTATTATTCCGCTCACAGCCATACAGTGACCAAGATCTACCTTATAGTGAAGAACGTTTCTCAGAAAGCTGCCCGCACCCTGAAAGAAGAAGGCCTTAATTGCTTTCAGTTCCAAGCTATAGCTGATGTTATTAAAGCTCTTGGGTGGCATTCAGTCATCCCTATTTATGAAGATACTGAATATGGCACTCACCTTATTTCATGCCTCCCGAGTGTGTTGAAAGATATGGGAATACGAATGGCTAACGTAATCGCCATTGATTCAGATTCGACACCAACTGAAATTAACGGAACTATTGACAAGTTAAAAGAGATGCAACCACATGTATTTGTTGTTCATATGAGCATGGATTTCGGAACAAGATTTATTTTGTCTGCGGAAGCAAAAGACATGATGGATAAAGGATATGCTTGGATACTTACCCAAGCGCTATCTTCTTTGACGGATCCTCAAGTGAGGATTGGGGATCCTTTGAAAGGATACATGCAAGGTGCATTGGGAGTGAGACCGATAGATTTGATTGCTAAAAAAACAGAAATGCGTAGGAAGAAAGAGAAAGATTTCAGGCTCAGGTTCGGAAGTAGCCTAGCTATCTATGGATGGTGGGCTTATCACACAATCGAAGCTTTAGCTATGGCAGTAGAGATGGCAGTAGAGAAAAATGATACAATCAATGGAACAATACTTGGCAGTGAAATTCTGGCCACTAATTTCAAAAATAATTCAGGGGTAAATTTTGATTTAAGAAATGGCCAACTAGACCAACCGGTGAAGTATGAAGTATACAATGTGATAGGAAAAAGAGAAAGGATAATAGGATCTTGGAACCCTGTAACTAAGCTTCAGAATCATGGTGGTGACGGTGGTAATACATCTGGTGAATACTCACTAGAGGATCCACTGTGGCCAGGTGACACAATGAAGAAACCACCGAGGTTGAGAATTGGAGTGACAAAAACAAATTCATTTCCGGAATTTGTGAATGCAGATAGTACGCCACCGACTGGCTTAGCTATTAACGTGTTCTTAAAAGCTCTCGATGTTTTGCCATTTCCGTTAAATTACTATGAGTTTATCAATTTAGCAAACAAAGCTGCAGGATGGATGGTGATACTGACGTCATTCCTGTTCATCTTAGTACTGCAAGTGTATACCGCCAATTTAACTTCAATTTTAACACAACAGGGAAAAATGAGAGAGCCTTCATTCAAGGACGAAAATGATATTAGGAATAAAAATTTGTGTGTGGGATATCAAAATGGGTCATGGGTGAGATGGTTTCTGATTGAACAAAAAGGATTCAAGTCGTCTCAGTTAAAGGCTTTAGGAAGTCGTGAAGAATACATTGAAGCATTGACAAATGGAACCAAAAATGGAGGAGTGGATGCTATTTTTGATGAAACTCCTTATCTCACACTCTTCCTCTCCAAATATAAATCTCACTTTATGTTGACAGGACCAATCAACAAAACTGGTGGATTTGCCTTTGCATTCCCTAAGAAGTCTGGTTTAGCCTCACATTTTTCGAAAGCAATCTTAAACGTGACTCAAGATTTGGAGTCATATCGTGTAGTGATGGCTAAGTGCTCCTTACCAACCTCCATTGAAGATTGGGAATTTGAAGACCGAAATGATGAAGAGACGGAAGGTTTGAGTATAACTGACTTTGGAGGCTTTTACCCTGTCCTATTATCCGTGGTGGCTCTCTTTTTAGGGCTTGTCATTCTTAATCCATCAATGATTCAACAGTTGTGTGATAAGAAGCCGTGTTTTAAGTCAGCTTAA 1998 0.3994 MAKRQKTFKDSSLLGVSLLLLVLLCLHITARASMVATDEGNRRQIPVGVILDLNSTLGCIINNTLALAIEDYYSAHSHTVTKIYLIVKNVSQKAARTLKEEGLNCFQFQAIADVIKALGWHSVIPIYEDTEYGTHLISCLPSVLKDMGIRMANVIAIDSDSTPTEINGTIDKLKEMQPHVFVVHMSMDFGTRFILSAEAKDMMDKGYAWILTQALSSLTDPQVRIGDPLKGYMQGALGVRPIDLIAKKTEMRRKKEKDFRLRFGSSLAIYGWWAYHTIEALAMAVEMAVEKNDTINGTILGSEILATNFKNNSGVNFDLRNGQLDQPVKYEVYNVIGKRERIIGSWNPVTKLQNHGGDGGNTSGEYSLEDPLWPGDTMKKPPRLRIGVTKTNSFPEFVNADSTPPTGLAINVFLKALDVLPFPLNYYEFINLANKAAGWMVILTSFLFILVLQVYTANLTSILTQQGKMREPSFKDENDIRNKNLCVGYQNGSWVRWFLIEQKGFKSSQLKALGSREEYIEALTNGTKNGGVDAIFDETPYLTLFLSKYKSHFMLTGPINKTGGFAFAFPKKSGLASHFSKAILNVTQDLESYRVVMAKCSLPTSIEDWEFEDRNDEETEGLSITDFGGFYPVLLSVVALFLGLVILNPSMIQQLCDKKPCFKSA 665
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi11g0273 665 SMART GluR_14 383 592 IPR001320 GO:0015276|GO:0016020
Mibi11g0273 665 Gene3D - 454 589 - -
Mibi11g0273 665 Gene3D - 106 279 - -
Mibi11g0273 665 PANTHER IONOTROPIC GLUTAMATE RECEPTOR 440 646 - -
Mibi11g0273 665 SUPERFAMILY Periplasmic binding protein-like II 377 589 - -
Mibi11g0273 665 Pfam Receptor family ligand binding region 105 336 IPR001828 -
Mibi11g0273 665 Gene3D - 458 563 - -
Mibi11g0273 665 SUPERFAMILY Periplasmic binding protein-like I 105 375 IPR028082 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi11g0273 Mibi-ChrMibi11 4367829 4372742 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi11g0273 424 591 Ion Channels AT2G29120 39.286 1.50e-25 110