Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi11g0263 ATGGAAGGAAGAAAGGAAGGCTCGGAATGCTCCAAAACAAGCCCTTCTAGCTATGATAATTGCAACCAATTAAAAGAAGTATGTCAGAGCAAGAGCAATGAAGAAGAAGGAGGTGATGAAGTGGAAGAAGAAGAAGAAGGTCAGAAGGAAATTATGAATAATATTAATGGAGGAAGTTCGAGCAATAGCACAGTGGAAGAGACGACAGAGAAGAAGCCGACGGTGAGGCCTTATGTAAGATCCAAGATGCCAAGGCTAAGATGGACTCCTGATCTTCATCTTCGCTTTGTTCATGCCGTTCAAAGGCTTGGAGGAGAAGAGAGAGCAACACCAAAGTTGGTTCTCCAATTAATGAACATCAAAGGATTGAGTATTGCTCATGTTAAGAGTCATCTACAGATGTACAGGAGCAAGAAAGTAGATGATCCAAGCCAAGGTACAAGAAGATTTCTCGTTAATTTATTGGCTGATCATAGGCACCTTGTAGAAAGTGGAGACAGAAATATGTACAGTCTCAGCCAAATTCCCATGCTTCAAGGTTATAATCCCCGCCAAACTTCAACCTTCAGATATGGATATGGGGATGCTTCTTTGGGTGTGTATGACAAAATGGTTCATAGCCCTTTCATGGGTCGGATGGATCAAGAATCCGGGTCATCTGGTGGGTTGCACAGCATTTTCCAGGTGGATCCTTCAAATTTTCTGAAGCAATCATCATCATCATTAAGAGAAAACCAAATACTCTCATTTGGTGGCCATCATCACGAACCTATCTACAATATTGGAACCAGATTAAGCCAGAATAATAATAGCACCGATCTTAACTACTCATCATTGACCCATATAGGGTCAATAAGAGCAGAAGAAAGGCGTCTTTCTTTTATGAAGGATCATGATCAAACAAAGAAGACGCTTAAAAGAAAGGCTTTTGATCTTGTAGATCAACTTGATTTGGATCTATCACTCAAGTTAAGTTCCAGGGTTGATATTGATGATAGTGCACAGAAGAATCATCATGAAGCAAGTAATCATTTGGAGGAGAATGATGAAGATGATAAAAATCTCTCACTGTCTTTGTATTCTCAAATTTCCAGCTCCTTTTCTAATACTAATAATAATGCTAGAAACAGCTTCAAGGAAGGAGTACACAATGATTATAAGGAGAAATCAAGGAGGAAAAAGGCTAGTACACTGGATCTGACTATATGA 1209 0.3954 MEGRKEGSECSKTSPSSYDNCNQLKEVCQSKSNEEEGGDEVEEEEEGQKEIMNNINGGSSSNSTVEETTEKKPTVRPYVRSKMPRLRWTPDLHLRFVHAVQRLGGEERATPKLVLQLMNIKGLSIAHVKSHLQMYRSKKVDDPSQGTRRFLVNLLADHRHLVESGDRNMYSLSQIPMLQGYNPRQTSTFRYGYGDASLGVYDKMVHSPFMGRMDQESGSSGGLHSIFQVDPSNFLKQSSSSLRENQILSFGGHHHEPIYNIGTRLSQNNNSTDLNYSSLTHIGSIRAEERRLSFMKDHDQTKKTLKRKAFDLVDQLDLDLSLKLSSRVDIDDSAQKNHHEASNHLEENDEDDKNLSLSLYSQISSSFSNTNNNARNSFKEGVHNDYKEKSRRKKASTLDLTI 402
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi11g0263 402 MobiDBLite consensus disorder prediction 366 402 - -
Mibi11g0263 402 FunFam Myb family transcription factor 82 140 - -
Mibi11g0263 402 Gene3D - 83 140 - -
Mibi11g0263 402 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL7-LIKE 63 269 - -
Mibi11g0263 402 MobiDBLite consensus disorder prediction 332 352 - -
Mibi11g0263 402 MobiDBLite consensus disorder prediction 52 68 - -
Mibi11g0263 402 MobiDBLite consensus disorder prediction 380 402 - -
Mibi11g0263 402 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 80 140 IPR017930 -
Mibi11g0263 402 MobiDBLite consensus disorder prediction 1 78 - -
Mibi11g0263 402 Pfam Myb-like DNA-binding domain 86 136 IPR001005 -
Mibi11g0263 402 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 84 139 IPR006447 GO:0003677
Mibi11g0263 402 MobiDBLite consensus disorder prediction 10 28 - -
Mibi11g0263 402 SUPERFAMILY Homeodomain-like 82 138 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi11g0263 Mibi-ChrMibi11 4011784 4013446 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi11g0263 75 176 G2-like Transcription Factor Family AT2G42660 59.091 9.75e-36 130
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Mibi11g0263 Myb_DNA-binding 1.9e-07 CL0123
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi11g0263 11 4011784 4013446 Mibi11g0263 11 4011784 4013446 ECH