Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi11g0206 ATGAATACTGTTGTTCAACAAGAGGTAGTGATCTTGGAGAATGGTCACACAAAGGGTTTAAGCAGGGAGATGAGGAATGGACATGGACATGGCAGGACTGCTCATAACTTGTCTTCTTCCTCCTTGCGCAAGAAATCTGACTTAGCCCTTGTTTCCAAGGTTCAATGGTCTTTACTCAGGAATTTGCTTGTCAATTTCCAGGAGGTTGTTCTTGGGACTAGGTTGTCCATTCTCTTTCTTGTGATTCCCTTTGCCATCGTCGCTGAAATCTACAGGTTCGGTCGACCTTGGGTTTTTGTGTTGAGCTTACTTGGACTTACACCACTAGCTGAACGCGTCAGCTTCTTGACGGAACAAGTTGCTTATCACACAGGTCCAACAGTTGGAGGACTCTTAAATGCAACATTTGGCAATGTCACAGAACTCGTAATAGCAATATTTGCTCTCAGAAATAATAAAATAGATGTGCTTAAGTATTCTCTCTTGGGTTCAATCCTTTCAAACCTTCTTTTAGTTCTTGGAACCTCTCTCTTCTGTGGTGGACTAGCAAACACTAGAGTAGAACAAAAATTTGATAGGAAACAGGCGGATGTGAACTCACTTATGCTGCTGCTGGCATTTTTGTGCCACTTGCTGCCTCTGCTGTTCGGATATTCTGGTATCTCTGCTGCTTCCAATATAGATCCATCTCTCCAGTTTTCCAGAGCTGCAAGTATTGTGATGCTGATCGCATATTTTGCTTACCTTGTCTTTCAACTTTGGACCCATCGCCAGTTATTTGAAGCTGAAGATGAAGAAGATGATAATGATAATGTTGCAGACGCAGCCGTGATAGGATTTTGGAGTGGGGTTGTTTGGCTTGCTGGATCGACTGTACTCATTGCTATCTTGTCTCAATTTGTGGTGGGCACAATTGAGGGTGCTTCAGATTCATGGAGCCTGTCTGTCAGCTTCCTTAGCATCATCTTGTTGCCAATAGTTGGCAATGCAACTGAACATGCAGGAGCAATCATATTTGCTCTGAAGAATAAGCTAGACATCTCATTAGGTGTTGCTTTAGGTTCTGCAGTGCAGATTTCAATGTTTGTGGTTCCCCTGTGTGTGGTTATTGCTTGGATGATGGGTATCAAAATGGACCTTGACTTCAACCTCCTAGAGACTGGTTCTCTTGCTTTGGCAATTTTAGTCCCATCCTTCGCTTTACAGGATGGGACTTCTCACTACATGAAAGGCCTTGTTCTCCTGTTCTGCTACATTGTTATTGGAGCATGCTTTTTTGTACTAAGAACACCACTCAACCATGCTGATGTTCCAAACATGATCCTTAAACCTGCAACCGAATCAGCTCTAATAGCTTAG 1359 0.4305 MNTVVQQEVVILENGHTKGLSREMRNGHGHGRTAHNLSSSSLRKKSDLALVSKVQWSLLRNLLVNFQEVVLGTRLSILFLVIPFAIVAEIYRFGRPWVFVLSLLGLTPLAERVSFLTEQVAYHTGPTVGGLLNATFGNVTELVIAIFALRNNKIDVLKYSLLGSILSNLLLVLGTSLFCGGLANTRVEQKFDRKQADVNSLMLLLAFLCHLLPLLFGYSGISAASNIDPSLQFSRAASIVMLIAYFAYLVFQLWTHRQLFEAEDEEDDNDNVADAAVIGFWSGVVWLAGSTVLIAILSQFVVGTIEGASDSWSLSVSFLSIILLPIVGNATEHAGAIIFALKNKLDISLGVALGSAVQISMFVVPLCVVIAWMMGIKMDLDFNLLETGSLALAILVPSFALQDGTSHYMKGLVLLFCYIVIGACFFVLRTPLNHADVPNMILKPATESALIA 452
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi11g0206 452 Pfam Sodium/calcium exchanger protein 97 254 IPR004837 GO:0016020|GO:0055085
Mibi11g0206 452 Pfam Sodium/calcium exchanger protein 283 421 IPR004837 GO:0016020|GO:0055085
Mibi11g0206 452 TIGRFAM caca2: calcium/proton exchanger 61 426 - -
Mibi11g0206 452 Gene3D - 270 426 IPR044880 -
Mibi11g0206 452 Gene3D - 126 265 IPR044880 -
Mibi11g0206 452 PANTHER VACUOLAR CALCIUM ION TRANSPORTER 24 429 IPR004713 GO:0006812|GO:0008324|GO:0016020
Mibi11g0206 452 FunFam Vacuolar cation/proton exchanger 271 427 - -
Mibi11g0206 452 MobiDBLite consensus disorder prediction 21 40 - -
Mibi11g0206 452 FunFam Vacuolar cation/proton exchanger 126 270 - -
Mibi11g0206 452 TIGRFAM cax: calcium/proton exchanger 79 426 IPR004798 GO:0006816|GO:0015369
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi11g0206 Mibi-ChrMibi11 3107798 3111949 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi11g0206 1 431 Antiporters AT2G38170 65.455 0.0 544
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi11g0206 11 3107798 3111949 Mibi04g2016 04 51199629 51205129 CCT
Mibi11g0206 11 3107798 3111949 Mibi11g0206 11 3107798 3111949 ECH