Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi11g0202 ATGAGTAATCGAATGGGATTTTTCCCACAAAGACGAAGAAAACAACTGCGAATGTCTTTCAAGGATTCCCTCAAAGCTCTTGAAGCTGATATTCATTTCGCCAATGACCTCGCTTCTGATCATTTAAGAGATTTTGATGGTGCCTGCCTCCGAATGAGATTATCTTACAGTCCAGCTGCCCAATTATTTCTTATACTGTTTCAGTGGACTGATTGTCACCTTGCTGGAGCCTTTGGATTGCTTAGAATTTTGATATACAAGGCATATGACAATGGGAAGAGAACAATGACTGTTTATGAAAGAAAAGCAAGTCTGAAGGAGTTCTATGGTGTAATCTTTCCCTCTTTAATACAACTACAAGGAGGAATCACTGTTGCTGAAGACTGGCGACAAAAAGATTTATGTTCTACCAAGTACAAGTCAAAAGATGCTATAAACAAAAGCAACATATCTGATACTGACGTAGACAGAGAAAATGAATGTGACATTTGCATGGAGATGAACAGCAGGGTTGTATTGCCTGTATGCAACCACTCAATGTGCATAAAATGTTACCAAGATTGGCGTACACGATCTCAATCTTGCCCGTTCTGTCGGGGAAATCTGGCACGAGTTAACTCAGGTGACCTCTGGATTTACATTAGCAGCAATGAGATAGATGACTTGGATTCAGTCATGCGGGAAAATGTAAATAGGCTATTTATGTACATTGAAAAGTTGCCTCAAGCACTTCCAGATCCTATTTTCACATCTTATCCTCAGCATTGGTGA 771 0.3982 MSNRMGFFPQRRRKQLRMSFKDSLKALEADIHFANDLASDHLRDFDGACLRMRLSYSPAAQLFLILFQWTDCHLAGAFGLLRILIYKAYDNGKRTMTVYERKASLKEFYGVIFPSLIQLQGGITVAEDWRQKDLCSTKYKSKDAINKSNISDTDVDRENECDICMEMNSRVVLPVCNHSMCIKCYQDWRTRSQSCPFCRGNLARVNSGDLWIYISSNEIDDLDSVMRENVNRLFMYIEKLPQALPDPIFTSYPQHW 256
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi11g0202 256 Pfam Zinc finger, C3HC4 type (RING finger) 158 203 - -
Mibi11g0202 256 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 143 208 IPR013083 -
Mibi11g0202 256 PANTHER RING FINGER PROTEIN 41, 151 18 250 - -
Mibi11g0202 256 SUPERFAMILY RING/U-box 146 203 - -
Mibi11g0202 256 ProSiteProfiles Zinc finger RING-type profile. 161 199 IPR001841 -
Mibi11g0202 256 SMART ring_2 161 198 IPR001841 -
Mibi11g0202 256 FunFam RING/U-box superfamily protein 139 208 - -
Mibi11g0202 256 ProSitePatterns Zinc finger RING-type signature. 176 185 IPR017907 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi11g0202 Mibi-ChrMibi11 3064411 3067564 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi11g0202 109 210 C3H Transcription Factor Family AT5G01960 28.972 5.98e-06 45.1
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi11g0202 11 3064411 3067564 Mibi04g2011 04 51149750 51152465 CCT
Mibi11g0202 11 3064411 3067564 Mibi11g0202 11 3064411 3067564 ECH