Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi11g0200 ATGATAAGGTGCCAAAGACGCATCCAGGTGTCGTTGACTCTGTGCTTAGTTTTCGGATTATTGGACCAATCGGTACCTTTTTCAGAAAAAGAAAACATTTTTCATATGCTGGTCCGGTTGCCCTTTTTACCTGTTTCCTGCCCAATAATCCCTTTCCCTTTGGCACAATCCTCTCTCTCTCTCTCTCTCTCTGTGGTTCGCGCGATTGGCTTGGCCTTTCGTTCTTCGTTAGGTAATTCCTGTTCTTCCATCATAATCTCTTCCACATTCATGTTTCCACCTAAATTTATTATTGTATTAATATCAGGAATTCAAACTATGAAATACGGCAAGGGGAAGGGAGCAGTTGAAGTTGATGATCGAATGGTTGGCAAGCGAAAGGCTGCTCTAAAGCCTGACAAAAGCAGTGCAAGAATGGCCAAGAAGGCGAGGAATGCCAAGAAAGATCCCAACAAACCAAAAAGACCGCCCAGTGCTTTTTTTGTCTTCCTTGAGGAGTTCAGAAAGACCTTTAAGGCAGAAAATCCTAATGTGAAGGCTGTATCAGCTGTGGGGAAGGCTGGAGGAGAGAAATGGAAATCTATGTCTGCTGCCGAGAAAGCTCCATATGAAGCCAAGGCTGCAAAAAGGAAAGCTGAGTATGAAAAACTCATGAATGCATACAATAAAAAGCAGACAAGCTCAGTCAATGGCAGAGATGAGGAATCGGACAAGTCCAAGTCTGAAGTGCACGATGAAGAGGACGAAGCCAGTGGAGAGGAAGCACACCAAGAAGAGGAGGATGATGAAGACGAGGATGATGAAGAGGATGATGACTGA 819 0.4432 MIRCQRRIQVSLTLCLVFGLLDQSVPFSEKENIFHMLVRLPFLPVSCPIIPFPLAQSSLSLSLSVVRAIGLAFRSSLGNSCSSIIISSTFMFPPKFIIVLISGIQTMKYGKGKGAVEVDDRMVGKRKAALKPDKSSARMAKKARNAKKDPNKPKRPPSAFFVFLEEFRKTFKAENPNVKAVSAVGKAGGEKWKSMSAAEKAPYEAKAAKRKAEYEKLMNAYNKKQTSSVNGRDEESDKSKSEVHDEEDEASGEEAHQEEEDDEDEDDEEDDD 272
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi11g0200 272 MobiDBLite consensus disorder prediction 228 246 - -
Mibi11g0200 272 MobiDBLite consensus disorder prediction 203 218 - -
Mibi11g0200 272 MobiDBLite consensus disorder prediction 189 272 - -
Mibi11g0200 272 MobiDBLite consensus disorder prediction 247 272 - -
Mibi11g0200 272 ProSiteProfiles HMG boxes A and B DNA-binding domains profile. 153 222 IPR009071 -
Mibi11g0200 272 MobiDBLite consensus disorder prediction 129 155 - -
Mibi11g0200 272 Gene3D High mobility group box domain 136 237 IPR036910 -
Mibi11g0200 272 CDD HMGB-UBF_HMG-box 153 218 - -
Mibi11g0200 272 MobiDBLite consensus disorder prediction 129 154 - -
Mibi11g0200 272 PANTHER HIGH MOBILITY GROUP B PROTEIN 4-RELATED 109 258 IPR031061 -
Mibi11g0200 272 SMART hmgende2 152 223 IPR009071 -
Mibi11g0200 272 SUPERFAMILY HMG-box 146 226 IPR036910 -
Mibi11g0200 272 Pfam HMG (high mobility group) box 153 222 IPR009071 -
Mibi11g0200 272 Coils Coil 204 224 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi11g0200 Mibi-ChrMibi11 3050477 3054265 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR HMG Mibi11g0200 HMG_box 7.3e-24 CL0114