Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi11g0196 ATGGTTGGCAATTGCTTCGGTTCCTTGATTTGTTGTAGAGGGAAGAATGAACCTGATGGCCAATCAGATGAACAAGTGATCGCAACTAAAAATTTTAGTTACAATTCAATGAGATCAGCGACAGGAGATTTTCATCCATCCAGCAGAATTGGTGGCGGAGGGTATGGAGTTGTCTACAAGGGAGTTTTAAGAGATGGTACTCTAGTTGCTATCAAGTCTCTTTCTGTAGAGTCTAAACAAGGAACAAAGGAGTTTATGACAGAAACCGATATTATATCAAAGATACAGCATCCAAACCTTGTGCAACTTATTGGCTGTTGTGTTGAGGGCCACCATCGGATGTTGGTGTATGAGTTTTTGGAAAACAATAGCCTTGAGAGTTCTTTGCTTGGCTCCAAAAGCAAACGTGTTGCTCTGGATTGGCCAAAGAGGGCTGTTATTTGCTGCGGTACGGCTTCTGGTCTTGAATTTCTTCATGAAGAGGCTCAACCAAACGTTGTTCACAGAGATATCAAGGCTAGCAACATTCTACTTGATAGAAAGTTTAATCCTAAAATAGGGGATTTTGGCCTTGCAAAGCTTTTTCCTGACAATGTCACTCACATTAGTACTCGAGTGGCAGGAACTGTGGGATACCTTGCACCAGAATATGCACTTCTAGGACAGCTTACAAGGAAGGCCGATGTGTACAGTTTTGGGATTCTCATGCTTGAAATAATCAGCGGTAAAAGTAGCAGTAAAGCTGCATTTGGAGATAATCTCTTGGTTCTAGTAGAATGGGCATGGAAGCTGAGAGATGAAGGCAGGCTTCTGGATCTTGTAGATCCCGAATTGAATGACTTTGATGAGAAGCAGATGTTGCGTTTCGTCAAGGTTGCTCTGTTCTGTACCCAAGCAGCCGCACAACACAGGCCCACAATGAAGCAAGTAATAAAAATGCTCACCAAGGAAGTGCATCTGAACGAGAGGGCACTAACTGAACCTGGAATTTATAGGTGGAATAGCTCGAAAGAGTGTGGCAATTCATCGTCATCATATCAAACAAACAAGAATAGAAGTTCCAAATTTCCCTACATGTCATCAAGCCATTTTAGTGGTGCAGATTTGGATACACAGATTCTTCCTAGGTAA 1131 0.4226 MVGNCFGSLICCRGKNEPDGQSDEQVIATKNFSYNSMRSATGDFHPSSRIGGGGYGVVYKGVLRDGTLVAIKSLSVESKQGTKEFMTETDIISKIQHPNLVQLIGCCVEGHHRMLVYEFLENNSLESSLLGSKSKRVALDWPKRAVICCGTASGLEFLHEEAQPNVVHRDIKASNILLDRKFNPKIGDFGLAKLFPDNVTHISTRVAGTVGYLAPEYALLGQLTRKADVYSFGILMLEIISGKSSSKAAFGDNLLVLVEWAWKLRDEGRLLDLVDPELNDFDEKQMLRFVKVALFCTQAAAQHRPTMKQVIKMLTKEVHLNERALTEPGIYRWNSSKECGNSSSSYQTNKNRSSKFPYMSSSHFSGADLDTQILPR 376
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi11g0196 376 Gene3D Phosphorylase Kinase; domain 1 12 119 - -
Mibi11g0196 376 ProSitePatterns Serine/Threonine protein kinases active-site signature. 166 178 IPR008271 GO:0004672|GO:0006468
Mibi11g0196 376 ProSitePatterns Protein kinases ATP-binding region signature. 50 72 IPR017441 GO:0005524
Mibi11g0196 376 Pfam Protein tyrosine and serine/threonine kinase 48 314 IPR001245 GO:0004672|GO:0006468
Mibi11g0196 376 FunFam Receptor-like serine/threonine-protein kinase At4g25390 13 119 - -
Mibi11g0196 376 SUPERFAMILY Protein kinase-like (PK-like) 24 314 IPR011009 -
Mibi11g0196 376 FunFam Putative LRR receptor-like serine/threonine-protein kinase 120 326 - -
Mibi11g0196 376 Gene3D Transferase(Phosphotransferase) domain 1 120 328 - -
Mibi11g0196 376 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 3 29 351 - -
Mibi11g0196 376 CDD STKc_IRAK 63 316 - -
Mibi11g0196 376 SMART serkin_6 44 306 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi11g0196 376 ProSiteProfiles Protein kinase domain profile. 44 320 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi11g0196 Mibi-ChrMibi11 2987472 2994102 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi11g0196 5 346 Receptor kinase-like Gene Family AT1G53420 46.839 1.17e-105 330
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Mibi11g0196 PK_Tyr_Ser-Thr 2e-45 CL0016