Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi11g0193 ATGGCTCTTGAGGTGTGCACTATCATGAGTTCTCCACTAAAGAAAATAATAATGGAGGAAGAAGATGTGAGGGTAGGAGCCAATAGGTATGGAGAAAGGCAACCAATAGGAGTAGCGGCTCAGAGCCAAGATGGAAAAGACTATACAGAGCCACCAGCTGCACCATTGTTTGAAGCTGGTGAGCTATCTTCATGGTCTTTTTACAGAGCTGGCATTGCAGAGTTTGTGGCCACTTTCTTGTTCCTATACGTCACAGTTTTGACTGTCGTTGGAGTGGCTAAATCTCCCTCCAAGTGCTCCACTGTTGGCACTCAAGGCATTGCTTGGGCTTTTGGTGGCATGATCTTTGCTCTTGTCTACGCCACTGCTGGTATCTCAGGAGGGCACATAAATCCGGCAGTAACATTTGGGCTGTTTCTGGCGAGGAAGGTGTCACTAACAAGGACAGTGATGTACATAATAATGCAATGCTTGGGAGCCATTGCCGGAGCCGCCGTGGTGAAGGCGTTTGAGCCACATACCTATGAGAGAATTGGTGGTGGTGCCAACACTTTAGCTTCTACCTACTCTCAAGGCTCAGGCCTTGGAGCTGAGATCCTTGGCACTTTTGTTCTTGTTTATACTGTTTTCTCTGCTACTGATGCCAAACGAAATGCCAGAGATTCCCATGTTCCTGTGTTGGCACCACTACCAATAGGGTTTGCTGTGTTTGTGGTGCATTTGGCTACCATTCCTGTGACAGGCACAGGTATCAATCCAGCCAGAAGTCTTGGTGCTGCTCTTATCTTCAACAAGCACCGAGCTTGGCATGATCAATGGATCTTCTGGGTTGGGCCTCTCATAGGAGCAACTCTTGCCGCTTTGTACCACCTGATAGTGATTAGGGCTATGCCCTTCAAGTCAAAGTAA 909 0.4785 MALEVCTIMSSPLKKIIMEEEDVRVGANRYGERQPIGVAAQSQDGKDYTEPPAAPLFEAGELSSWSFYRAGIAEFVATFLFLYVTVLTVVGVAKSPSKCSTVGTQGIAWAFGGMIFALVYATAGISGGHINPAVTFGLFLARKVSLTRTVMYIIMQCLGAIAGAAVVKAFEPHTYERIGGGANTLASTYSQGSGLGAEILGTFVLVYTVFSATDAKRNARDSHVPVLAPLPIGFAVFVVHLATIPVTGTGINPARSLGAALIFNKHRAWHDQWIFWVGPLIGATLAALYHLIVIRAMPFKSK 302
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi11g0193 302 Gene3D Glycerol uptake facilitator protein. 54 301 IPR023271 -
Mibi11g0193 302 PRINTS Major intrinsic protein family signature 197 215 IPR000425 GO:0015267|GO:0016020|GO:0055085
Mibi11g0193 302 PRINTS Major intrinsic protein family signature 111 135 IPR000425 GO:0015267|GO:0016020|GO:0055085
Mibi11g0193 302 PRINTS Major intrinsic protein family signature 148 167 IPR000425 GO:0015267|GO:0016020|GO:0055085
Mibi11g0193 302 PRINTS Major intrinsic protein family signature 273 293 IPR000425 GO:0015267|GO:0016020|GO:0055085
Mibi11g0193 302 PRINTS Major intrinsic protein family signature 69 88 IPR000425 GO:0015267|GO:0016020|GO:0055085
Mibi11g0193 302 PRINTS Major intrinsic protein family signature 233 255 IPR000425 GO:0015267|GO:0016020|GO:0055085
Mibi11g0193 302 PANTHER AQUAPORIN OR AQUAGLYCEROPORIN RELATED 28 297 IPR034294 -
Mibi11g0193 302 SUPERFAMILY Aquaporin-like 62 294 IPR023271 -
Mibi11g0193 302 TIGRFAM MIP: MIP family channel proteins 73 290 IPR000425 GO:0015267|GO:0016020|GO:0055085
Mibi11g0193 302 CDD MIP 69 293 IPR000425 GO:0015267|GO:0016020|GO:0055085
Mibi11g0193 302 Pfam Major intrinsic protein 61 290 IPR000425 GO:0015267|GO:0016020|GO:0055085
Mibi11g0193 302 ProSitePatterns MIP family signature. 129 137 IPR022357 -
Mibi11g0193 302 FunFam Probable aquaporin PIP1-2 54 302 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi11g0193 Mibi-ChrMibi11 2966264 2968935 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi11g0193 19 302 Major Intrinsic Protein MIP AT3G61430 78.169 7.11e-162 450