Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi11g0170 ATGTATGTATATGGCGCTGATAAAAGCGAAGCAAAGAAGACAACTTTTTGCTTATTGCTTAAAGCAGGTGCCAAGGGAAGAAGGGAAAGAGAAGAAGGGTTTGAGAAATTTGAGATTTTGGAGATGGACGTGATTAAGTCTCAGCAAATTTCATCAAGACCCGTAGAGAAGGTCATAGTGCATCCTCTTGTTCTTCTCAGCATCGTCGATAACTACAATCGTGTTGCCAAAGACACTCGCAAACGTGTTGTCGGCGTCTTGCTTGGTAGTTCATTCAAGGGCACCGTCGATGTTAGCAACAGCTATGCAGTGCCATTTGAGGAAGATGACAAGGACCCAAGCATCTGGTTCCTCGACCATAATTACCATGATTCCATGTTTTCTATGTTCAAGAGAATAAATGCCAAGGAGCATGTCGTGGGATGGTATAGTACTGGCCCAAAGTTAAGGGAGAATGATCTTGACATTCACAGATTATTCCACAACTATGTCCCAAATCCTGTGCTGGTCATCATTGATGTCCAGCCTAAGGAGCTAGGGATACCTACCAAGGCTTATTATGACGTTGAAGAAGTAAAGGAGAATGCTACACAAAAGAGCCAGAAGGTTTTTGTTCACGTGCCTTCAGAAATTGCTGCTCATGAGGTTGAGGAAATTGGAGTGGAACACTTGTTGAGGGATGTTAAAGATACGACCATCAGTACACTTGCAACTGAGGTTTCTGGTAAACTTACTGCGCTAAAAGGATTAGATGCTAGATTGAAAGAGATACGGGGTTACCTTGATCTGGTTATTGATGGAAAGCTTCCATTGAACCATGAGATACTTTACCATCTGCAGGATGTGTTCAACCTCCTTCCTAATCTCAACGTGTCAGAGTTAATCAAGGCCTTTGCAGTGAAAACAAATGATATGATGCTGGTAATTTATCTTTCTTCTCTGATCAGAAGCGTCATTGCACTTCACAACTTGATTAATAACAAGATGCTGAACAAGGAACATGAGAAAGCTGAAGATGCAAAGCCAGTTACTATCCCTGCTGTCAGTGGAAGCTGA 1056 0.4223 MYVYGADKSEAKKTTFCLLLKAGAKGRREREEGFEKFEILEMDVIKSQQISSRPVEKVIVHPLVLLSIVDNYNRVAKDTRKRVVGVLLGSSFKGTVDVSNSYAVPFEEDDKDPSIWFLDHNYHDSMFSMFKRINAKEHVVGWYSTGPKLRENDLDIHRLFHNYVPNPVLVIIDVQPKELGIPTKAYYDVEEVKENATQKSQKVFVHVPSEIAAHEVEEIGVEHLLRDVKDTTISTLATEVSGKLTALKGLDARLKEIRGYLDLVIDGKLPLNHEILYHLQDVFNLLPNLNVSELIKAFAVKTNDMMLVIYLSSLIRSVIALHNLINNKMLNKEHEKAEDAKPVTIPAVSGS 351
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi11g0170 351 SMART pad1_6 57 191 IPR000555 GO:0005515|GO:0008233|GO:0008237
Mibi11g0170 351 FunFam 26S proteasome non-ATPase regulatory subunit 7 50 235 - -
Mibi11g0170 351 Pfam JAB1/Mov34/MPN/PAD-1 ubiquitin protease 55 165 IPR000555 GO:0005515|GO:0008233|GO:0008237
Mibi11g0170 351 Gene3D Cytidine Deaminase, domain 2 50 235 - -
Mibi11g0170 351 CDD MPN_RPN7_8 56 336 IPR033858 GO:0005838
Mibi11g0170 351 Pfam Maintenance of mitochondrial structure and function 215 326 IPR024969 -
Mibi11g0170 351 ProSiteProfiles MPN domain profile. 58 192 IPR037518 -
Mibi11g0170 351 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT F-RELATED 52 334 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi11g0170 Mibi-ChrMibi11 2567321 2573355 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi11g0170 39 289 Eukaryotic Initiation Factors Gene Family AT2G39990 28.627 1.51e-26 105