Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi11g0164 ATGAACAGGGGAATTGAAGTTTTCTCTCCAGCCTCTTACCTTGAAAGCTCCAATTGGTTGTTCCAAGAGAGCAAGGGAACAAAATGGACCCCAGAAGAGAATAAGCGGTTTGAGGATGCTTTGGCCTTGTATGACAAAGATACACCAGATCGTTGGTTGAAAGTTGCAGCTAAGGTTCCTGGGAAGACAGTGGGGGATGTGATTAGGCAGTACAAACAACTTGAAGAAGATGTTAGTGTCATAGAGGCAGGGTTGATCCCAGTTAGTGAGTATGAGTATGATGATAGCAGTTCTTTCACTTTGGAATGGGACAATAGTCAAGCTTTTGATGATTTCAAGCCATTCTATAGTGTTGGTGACAAAAGGGGTTCTTCCACTCGACCATCTGAGCAGGAAAGGAAAAAAGGAATTCCATGGACTGAAGAGGAGCACAGGCAATTTCTGATGGGACTGAAGAAGTATGGGAAAGGGGACTGGAGAAACATATCTCGTAATTTTGTGACCACAAGGACACCAACTCAGGTTGCTAGTCATGCTCAGAAGTATTTCATCCGGCAGCTTACAGGAGGAAAGGACAAAAGGAGATCAAGCATCCATGACATCACAATTCTCAACCTTGAAACCAAGCCTTCATCATCTCCTTCATCAGAAAGTCACAGACCTTCTTCTCCTGATCGCTCAGTGATGAAGGTTGTGAATGATCTTCCTAATAAGAATCCAAATTTCTCTACCATGGTTAAACAGGAGTATGACTCAAAATTGTCATACGAGTCCATGCCAATGACGTTCAATTCACCAAACGGAAACATGTTCATGCCACCACCTTATTTTGGGATTTCTTCAGTTGGATCTGGACCTCATCAGGAGCAATGTTTACTCAGAGGTTCTCTCTAA 894 0.4306 MNRGIEVFSPASYLESSNWLFQESKGTKWTPEENKRFEDALALYDKDTPDRWLKVAAKVPGKTVGDVIRQYKQLEEDVSVIEAGLIPVSEYEYDDSSSFTLEWDNSQAFDDFKPFYSVGDKRGSSTRPSEQERKKGIPWTEEEHRQFLMGLKKYGKGDWRNISRNFVTTRTPTQVASHAQKYFIRQLTGGKDKRRSSIHDITILNLETKPSSSPSSESHRPSSPDRSVMKVVNDLPNKNPNFSTMVKQEYDSKLSYESMPMTFNSPNGNMFMPPPYFGISSVGSGPHQEQCLLRGSL 297
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi11g0164 297 MobiDBLite consensus disorder prediction 207 222 - -
Mibi11g0164 297 FunFam Transcription factor SRM1 21 88 - -
Mibi11g0164 297 SMART sant 135 185 IPR001005 -
Mibi11g0164 297 SMART sant 25 77 IPR001005 -
Mibi11g0164 297 MobiDBLite consensus disorder prediction 125 139 - -
Mibi11g0164 297 MobiDBLite consensus disorder prediction 120 139 - -
Mibi11g0164 297 CDD SANT 28 74 IPR001005 -
Mibi11g0164 297 Pfam Myb-like DNA-binding domain 28 74 IPR001005 -
Mibi11g0164 297 Pfam Myb-like DNA-binding domain 138 183 IPR001005 -
Mibi11g0164 297 SUPERFAMILY Homeodomain-like 132 186 IPR009057 -
Mibi11g0164 297 CDD SANT 138 183 IPR001005 -
Mibi11g0164 297 Gene3D - 21 88 - -
Mibi11g0164 297 MobiDBLite consensus disorder prediction 207 228 - -
Mibi11g0164 297 FunFam transcription factor MYB1R1 137 188 - -
Mibi11g0164 297 ProSiteProfiles Myb-like domain profile. 131 183 IPR001005 -
Mibi11g0164 297 PANTHER DUPLICATED HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN-RELATED 23 248 IPR043363 -
Mibi11g0164 297 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 134 186 IPR006447 GO:0003677
Mibi11g0164 297 Gene3D - 137 187 - -
Mibi11g0164 297 ProSiteProfiles SANT domain profile. 24 79 IPR017884 -
Mibi11g0164 297 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 131 187 IPR017930 -
Mibi11g0164 297 ProSiteProfiles SANT domain profile. 139 187 IPR017884 -
Mibi11g0164 297 SUPERFAMILY Homeodomain-like 27 82 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi11g0164 Mibi-ChrMibi11 2490057 2491308 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Mibi11g0164 Myb_DNA-binding 2.4e-07 CL0123
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi11g0164 11 2490057 2491308 Mibi11g0164 11 2490057 2491308 ECH
Mibi11g0164 11 2490057 2491308 Mibi08g1285 08 28676820 28678045 ECH
Mibi08g1285 08 28676820 28678045 Mibi11g0164 11 2490057 2491308 ECH