Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi11g0158 ATGACTGCTGCTATGGACTTGAATGCCTCACCCGTTCCAGAGGAAGATGAGGATCCATTTGAGGGGCATGTAGAAGACTTCACTGCCCAGGAAGAACGTGTAGAAACTGCAGTTGATATAGCCCGCCGGGAGCGTGAAGAAAGAAAAAGACGATTGAAAAGAGAACGTCCAGATGACAGATCTATTTATGTATCTCCTTCACCTGGCTATGATCAACTATTTCAGACGAAGTCCCTTAAATCATATGATAGAAGCAGGCTTCCTCCAGGGTGGTTGGATTGCCCATCATTTGGTCAAGAAGTTTTTTGCATGATACCTTCTAAGGTTCCACTTGGTGAATCGTTCAATGATTGTATTGCTCCTGGTAGAAGATACTCATTCAAACAAGTGATACATCAGCAAAGGGTTTTAGGGAGAAAACTTGGTATGGTGATTGATTTGACAAATACTTCTCGATATTATCCAGTGTCAGATCTAAAAAAAGAGGGTATCAAGCACGTAAAGATACAATGCAAGGGGCGTGGTTCTGTACCTGATAATTTATCTGTGAATCAATTCGTCCATGAGGTTACACAATTTCTATCATGTCAAAAACACTCAAAGAAGTATATACTTGTCCATTGTACACATGGACATAATCGTACAGGATACATGATCATCCATTATCTTATGCGTACCATGTCAATGTCTGTCACACAGGCAATAAAAATATTTTCTGATGCACGCCCTCCTGGAATCTACAAACCTGATTACATTGAGGCCTTATACACATTTTATCATGAAAAAAGGCCTGACATGGTGGTTTGTCCTTCTACTCCAGAGTGGAAGAGATCTTCAGAGTTTGATCTTAATGGTGAAGCAGTGCCAGATGATGATGATGATGGAATGCCAGGCCCTCCTTTGGATGAGAACCACGAGACAGATGTGTTGATGACAAATGATGATATCCTGGGAGATGAGATACCTAATGATCAGCAAGATTCATTCCGGCAATTCTGTTATCAATCACTTAAATTGGGTGCTGGGGCTAGGGGACATACACAATTTCCTGGATCACACCCAGTTTCTCTGAACAGGGAAAATTTGCAGTTGTTACGGCAGCGTTATTATTATGCAACATGGAAAGCTGATGGGACGCGGTATATGATGCTTATAACAATGGATGGTTGTTACTTAATTGATAGAAATTTCAATTTTCGAAGGGTCCAAATGAGGTTTCCTTGCAGGGGCACAAATGATGTGTTAGCCGAGAAGACCCACCACTACACATTACTTGATGGGGAGATGATTATTGATACATTGCCTGATTCAAAGAAGCAGGAAAGGAGATACCTTATATATGATATGATAGCCATCAACCATGTATCTGTGATAGAGCGACCTTTTTATGAAAGGTGGAAGATGCTTGAGAAAGAAGTGATTGAACCTAGGAATTGGGAGCGACATAATATATACCAGAGCAGAAACCCTTACTATAGATATGACATGGAACCATTCAGGGTGAGGAGAAAAGATTTTTGGTTGCTCTCTACAGTCACAAAGCTCTTAACAGAATTCATTCCAAAACTCTCTCATGCTGCTGACGGCCTCATATTTCAGGGCTGGGATGATCCTTATGTACCACGCACTCATGAAGGCCTCCTGAAGTGGAAATATCCTGAGATGAATTCTGTTGATTTCCTCTTTGAGGTTGATGATGATGGTGAGCAAATTTTTCTTTACGAACGAGGAAAGAAGAGGCTCATGGAAGGGAATAGGGTAGCATTCAAAGATGGTTCGGATCCCTCATTTTATTCTGGAAAGATCATAGAATGTTCTTGGGACTCTGATAACCATGAATGGGAATTCATGCGAGTGAGAACTGACAAATCAACTCCAAATGAATTCAATACTTTCAAGAAGGTGATGCGAAGCATAAAAGACAATATTACGGAAGATGTTTTGTTGAATGAGATATCCGAGATTATTCGCCTTCCCATGTATGCTGATAGGATAAGAATTGACAGTAAAGCACACCATCATACTAACGCCGCACGGAGAAGGTGA 2046 0.4091 MTAAMDLNASPVPEEDEDPFEGHVEDFTAQEERVETAVDIARREREERKRRLKRERPDDRSIYVSPSPGYDQLFQTKSLKSYDRSRLPPGWLDCPSFGQEVFCMIPSKVPLGESFNDCIAPGRRYSFKQVIHQQRVLGRKLGMVIDLTNTSRYYPVSDLKKEGIKHVKIQCKGRGSVPDNLSVNQFVHEVTQFLSCQKHSKKYILVHCTHGHNRTGYMIIHYLMRTMSMSVTQAIKIFSDARPPGIYKPDYIEALYTFYHEKRPDMVVCPSTPEWKRSSEFDLNGEAVPDDDDDGMPGPPLDENHETDVLMTNDDILGDEIPNDQQDSFRQFCYQSLKLGAGARGHTQFPGSHPVSLNRENLQLLRQRYYYATWKADGTRYMMLITMDGCYLIDRNFNFRRVQMRFPCRGTNDVLAEKTHHYTLLDGEMIIDTLPDSKKQERRYLIYDMIAINHVSVIERPFYERWKMLEKEVIEPRNWERHNIYQSRNPYYRYDMEPFRVRRKDFWLLSTVTKLLTEFIPKLSHAADGLIFQGWDDPYVPRTHEGLLKWKYPEMNSVDFLFEVDDDGEQIFLYERGKKRLMEGNRVAFKDGSDPSFYSGKIIECSWDSDNHEWEFMRVRTDKSTPNEFNTFKKVMRSIKDNITEDVLLNEISEIIRLPMYADRIRIDSKAHHHTNAARRR 681
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi11g0158 681 Pfam mRNA capping enzyme, C-terminal domain 556 649 IPR013846 -
Mibi11g0158 681 MobiDBLite consensus disorder prediction 23 61 - -
Mibi11g0158 681 Gene3D - 552 643 IPR012340 -
Mibi11g0158 681 MobiDBLite consensus disorder prediction 284 306 - -
Mibi11g0158 681 SUPERFAMILY DNA ligase/mRNA capping enzyme, catalytic domain 313 552 - -
Mibi11g0158 681 ProSiteProfiles Dual specificity protein phosphatase domain profile. 114 264 IPR020422 GO:0006470|GO:0008138
Mibi11g0158 681 ProSitePatterns Tyrosine specific protein phosphatases active site. 206 216 IPR016130 GO:0016311|GO:0016791
Mibi11g0158 681 Pfam mRNA capping enzyme, catalytic domain 353 551 IPR001339 GO:0004484|GO:0005524|GO:0006370
Mibi11g0158 681 CDD RNA_5'-triphosphatase 90 256 - -
Mibi11g0158 681 Gene3D DNA ligase/mRNA capping enzyme 312 551 - -
Mibi11g0158 681 MobiDBLite consensus disorder prediction 1 67 - -
Mibi11g0158 681 FunFam mRNA capping enzyme, putative 312 549 - -
Mibi11g0158 681 FunFam mRNA capping enzyme family protein 83 297 - -
Mibi11g0158 681 FunFam mRNA capping enzyme family protein 550 658 - -
Mibi11g0158 681 CDD Adenylation_mRNA_capping 342 552 IPR001339 GO:0004484|GO:0005524|GO:0006370
Mibi11g0158 681 PANTHER MRNA-CAPPING ENZYME 82 663 - -
Mibi11g0158 681 SMART dsp_5 142 261 IPR020422 GO:0006470|GO:0008138
Mibi11g0158 681 ProSiteProfiles ATP-dependent DNA ligase family profile. 435 579 IPR012310 GO:0003910|GO:0005524|GO:0006281|GO:0006310
Mibi11g0158 681 SUPERFAMILY Nucleic acid-binding proteins 554 665 IPR012340 -
Mibi11g0158 681 PIRSF mRNA_capping_HCE 73 681 IPR017074 GO:0004484|GO:0006370|GO:0140818
Mibi11g0158 681 Pfam Dual specificity phosphatase, catalytic domain 139 259 IPR000340 GO:0008138|GO:0016311
Mibi11g0158 681 Gene3D Protein tyrosine phosphatase superfamily 66 282 IPR029021 -
Mibi11g0158 681 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 87 277 IPR029021 -
Mibi11g0158 681 ProSiteProfiles Tyrosine specific protein phosphatases domain profile. 184 253 IPR000387 GO:0016311|GO:0016791
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi11g0158 Mibi-ChrMibi11 2391697 2401011 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi11g0158 1 681 Protein tyrosine phosphatase (PTP) family AT3G09100 69.186 0.0 960