Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi11g0154 ATGCTTCAGATTCGCCTAAGTAAGTTACCAGCCTCAGATGGTTCAGCAGGGGTGAGATCTGCTCCTGTTGAGACTGCAATTGCATGCCCTGACCATCTAGTCTTGGCTGAGCTACCTGTAGCTAAGGGCATTGGTGCAGCCACTGCCACTTCCCTTGTTAAGAATGTAGGACGGAGGTCCCGCCGCCAGCTTGGCAATAGAGTTCATTTCTGTGTTCGTTGTGATTTTCCCATAGGTATCTATGGACGATTGAGCCCTTGTGAGCATGCCTTCTGCCTTGATTGTGCTAGGAGTGACCCAATGTGCTGCCTGTGTGATGAACGAATCCAGAAAATTCAAACCATCAAAATGTTGGAAGGAATCTTTATTTGCGCTGCTCCTCATTGTTACAAGTCATTCTTGAAGCAGACTGAATTTGAATCTCACATCCAAGAAAGGCACTCTGATCTTCTTCGGCCTAATGCAGATAGAGAAGATGGAAATGAGTCAGAGGCACAGAGTGTTAGGCAATCTACAGCATCAGACTCCACTGCTCGAGGTCCCCAGAGGCCCCTTTTTTCTCCTGCTTCAAAGTCACAGCTTCATGATTGGGATGACAAAAGCCATCAACAGCCAATGAGAGAGCAAACCCCTTCAAGGCCAATTCAACAGCCAAAGCCACCATTTTTGGGTCAAGTACCTTATCCTTCTTTGGATTCTCAATCAGGCAACATTGGAGCTATTCAACAGGACTTTCATCCACCAAGTTTTGACATGAAGCACTCCCAAGGTGAATCCTCCCATCTTGTTGAGCGACAGCAAGGAGTTACTTCAGAGAACCAGATTCATGATTATCCACTCATGCATTCTATCCAGCCACCCAATTTTGCCATGCTAGTTAATCCTAGTGCATTGTTGAAACCTCCTATGGCATTTGGTTACCCCCCTTACCCACAAGAGGGAGCTCAGTCCTTTCATGCTTCATCCTATGACATGCCTAGGCAGAACTCATCTTCTGAACTTGGTTTAGATCAGGGTTCATTACTGGGATACCCACCAGGTCCTGTAAGTGGCCCAAATTTTCCAGCAAATTATCCTCAGGCCTGGAATGCAGGAATGACTGGTGTGCCTTTTGATCAAGCTCAGGGTGGTATGTTTCTTGATCCAAGGGATGCTAAAGGGATGTAA 1167 0.4653 MLQIRLSKLPASDGSAGVRSAPVETAIACPDHLVLAELPVAKGIGAATATSLVKNVGRRSRRQLGNRVHFCVRCDFPIGIYGRLSPCEHAFCLDCARSDPMCCLCDERIQKIQTIKMLEGIFICAAPHCYKSFLKQTEFESHIQERHSDLLRPNADREDGNESEAQSVRQSTASDSTARGPQRPLFSPASKSQLHDWDDKSHQQPMREQTPSRPIQQPKPPFLGQVPYPSLDSQSGNIGAIQQDFHPPSFDMKHSQGESSHLVERQQGVTSENQIHDYPLMHSIQPPNFAMLVNPSALLKPPMAFGYPPYPQEGAQSFHASSYDMPRQNSSSELGLDQGSLLGYPPGPVSGPNFPANYPQAWNAGMTGVPFDQAQGGMFLDPRDAKGM 388
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi11g0154 388 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 68 122 IPR013083 -
Mibi11g0154 388 ProSitePatterns Zinc finger RING-type signature. 87 96 IPR017907 -
Mibi11g0154 388 ProSitePatterns Zinc finger C2H2 type domain signature. 124 147 IPR013087 -
Mibi11g0154 388 MobiDBLite consensus disorder prediction 145 164 - -
Mibi11g0154 388 MobiDBLite consensus disorder prediction 165 189 - -
Mibi11g0154 388 PANTHER E3 UBIQUITIN-PROTEIN LIGASE HAKAI-RELATED 1 383 IPR040383 GO:0016567|GO:0061630
Mibi11g0154 388 MobiDBLite consensus disorder prediction 145 267 - -
Mibi11g0154 388 MobiDBLite consensus disorder prediction 253 267 - -
Mibi11g0154 388 ProSiteProfiles Zinc finger C2H2 type domain profile. 122 148 IPR013087 -
Mibi11g0154 388 CDD RING-HC_HAKAI_like 69 105 IPR040380 -
Mibi11g0154 388 MobiDBLite consensus disorder prediction 228 242 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi11g0154 Mibi-ChrMibi11 2359806 2362463 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi11g0154 1 366 C2H2 Transcription Factor Family AT5G01160 47.200 6.79e-98 294
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi11g0154 11 2359806 2362463 Mibi11g0154 11 2359806 2362463 ECH