Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi11g0131 ATGGAGGGTCACATCATGGAGGTTGATGAAAAACCCAACCTTGAGCTCGACAAAGCACTCGCCGCCGGAGACGCCGGCAGTGGCGACGACGATTTAACCGCCTTAGGCGACGGAGGTGGCGGTTGTTCTTCCCAGGGGGCTAGAGACAGAGTCAAGGGTCCTTGGTCTCCCGAGGAAGACGCCATTTTGAGTCGACTCGTTAGCAAGTTTGGCGCCAGAAATTGGAGCTTGATTGCTCGTGGCATCTCTGGAAGATCCGGCAAATCTTGCCGCCTCCGATGGTGTAATCAACTCGACCCTGCTGTTAAACGCAAACCCTTTTCTGATGAGGAGGATCGGATCATAGTTGCAGCACATGCAATTCATGGGAACAAATGGGCAGCCATAGCGAGACTTCTACCAGGAAGAACAGATAATGCTATTAAGAATCATTGGAATTCTACTTTGAGGCGCAGGGGAATAGAATTTGATAAAGTTAAAATAGAAGCTTGCAACACGGTCGATGATGTTAGCTTGGAGAAAGCAAAAGCATCCTCTGAAGAAACTCAGTCATGTGGGGATGTTAATTCCTTGAGATCCTCGGAAGGAAGAGATGTCAGTTCTGTGGAGAATATGGAGGATAAATATGAAGACAAAGCACAGACGGAGAGCCAAATAAATCATGAAGTCAAGGATCCGCCTACTCTTTTCCGGCCTCAAGCACGTATTAGTGCTTTTAGTGTATATAACTCATTGGATGGTTCACAAACTGTAACACCAACCTCTAGGCCTGTTCCAATGCAAGGACCACTTTTTCAAGCATCAAAGCCAGGCGTTGAAATTTGTAAATTGCTGGATGGAATTTATAGCTGTGACGTGTCTGTTCCTAACCACTGTGGCTATGGTTGTTGCACTGGTCTAAGCCATGAAAACGCCAAAAGCTCATTGTTGGGGCCAGAATTTATTGAATTTTCAGAGCCCCTGTCATTTCCGAGTTTTGAGTTGGCAGCCATAGCAACAGACATCAGTAACCTTGCTTGGCTGAAAAGTGGGTTGGAGAATAGTAGTGTCAAAATGATGGGTGACTCAGCCGGCAGGGTGATATCTCATGAATCTCAAGTGAACAATGCCAAGAGTATGATCAGTTCTTTTGAGTGA 1137 0.4635 MEGHIMEVDEKPNLELDKALAAGDAGSGDDDLTALGDGGGGCSSQGARDRVKGPWSPEEDAILSRLVSKFGARNWSLIARGISGRSGKSCRLRWCNQLDPAVKRKPFSDEEDRIIVAAHAIHGNKWAAIARLLPGRTDNAIKNHWNSTLRRRGIEFDKVKIEACNTVDDVSLEKAKASSEETQSCGDVNSLRSSEGRDVSSVENMEDKYEDKAQTESQINHEVKDPPTLFRPQARISAFSVYNSLDGSQTVTPTSRPVPMQGPLFQASKPGVEICKLLDGIYSCDVSVPNHCGYGCCTGLSHENAKSSLLGPEFIEFSEPLSFPSFELAAIATDISNLAWLKSGLENSSVKMMGDSAGRVISHESQVNNAKSMISSFE 378
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi11g0131 378 PANTHER MYB PROTEIN-RELATED 52 203 - -
Mibi11g0131 378 MobiDBLite consensus disorder prediction 21 55 - -
Mibi11g0131 378 Pfam Myb-like DNA-binding domain 55 112 - -
Mibi11g0131 378 MobiDBLite consensus disorder prediction 177 198 - -
Mibi11g0131 378 FunFam Transcription factor MYB44 106 152 - -
Mibi11g0131 378 CDD SANT 54 96 IPR001005 -
Mibi11g0131 378 SMART sant 51 100 IPR001005 -
Mibi11g0131 378 SMART sant 103 151 IPR001005 -
Mibi11g0131 378 Gene3D - 51 103 - -
Mibi11g0131 378 ProSiteProfiles Myb-like domain profile. 99 149 IPR001005 -
Mibi11g0131 378 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 103 153 IPR017930 -
Mibi11g0131 378 CDD SANT 106 149 IPR001005 -
Mibi11g0131 378 Gene3D - 106 152 - -
Mibi11g0131 378 FunFam MYB transcription factor 52 103 - -
Mibi11g0131 378 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 47 102 IPR017930 -
Mibi11g0131 378 SUPERFAMILY Homeodomain-like 49 145 IPR009057 -
Mibi11g0131 378 MobiDBLite consensus disorder prediction 175 204 - -
Mibi11g0131 378 ProSiteProfiles Myb-like domain profile. 47 98 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi11g0131 Mibi-ChrMibi11 2009594 2012815 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi11g0131 41 375 MYB Transcription Factor Family AT3G09230 49.855 1.82e-104 311
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Mibi11g0131 Myb_DNA-bind_6 9.6e-16 CL0123