Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi11g0129 ATGCCATCAAATATACAGATTTCCCTTGTAGATTTGGAGCAGGCAAGCCATCGCAGTGACATGAGCACTGAAGCTAGCATTTGCTTCTCTGATGTTGAAGAGGGTTCTTGCTATTCCCACTTCTATTCAACAAATGGTGGCTCATATGATGACTATAGCTTTTCTTGTGTTTCTGATCCTGAGGCTATTGAGGGTGTTCCTGAGTCTGGAAGAGCTTCTTCTGTCACTGAATGTTCAGTGGAGGTGGAAATTGAAAGTGGGGTTCCTGAAATCAAGGTGCATTTGGATGAAGTAGAGAAAGAGTGTAGGATTTGTCACATGGGTTTGGAAAGTGAAAGTCATGAGGCTGGGGTTCCAATTGAATTGGGTTGTTCCTGCAAGGATGATCTTGCTGCCGCTCATAAACTCTGTGCTGAAACTTGGTTCAAGATTAAAGGGAGCAGGACCTGTGAAATCTGTCATTCTGTGGCACGGAATGTATTTGGGATAAACGAGGATACAACCGAGAATCTAAGTGACAGCAGCAATGCTATCGCGATATCTTCACTTCCAGTACCGGCTTCCCCGGAAACTACTCGAAGATTCTGGCAAGGCCGTGGCTTCCTGAATTTTATGCTTATCTGTATGGTTATTGCGTTTGTCATATCATGGGCTTTTCACTTCCATTTCCATTCACCTTAG 681 0.4405 MPSNIQISLVDLEQASHRSDMSTEASICFSDVEEGSCYSHFYSTNGGSYDDYSFSCVSDPEAIEGVPESGRASSVTECSVEVEIESGVPEIKVHLDEVEKECRICHMGLESESHEAGVPIELGCSCKDDLAAAHKLCAETWFKIKGSRTCEICHSVARNVFGINEDTTENLSDSSNAIAISSLPVPASPETTRRFWQGRGFLNFMLICMVIAFVISWAFHFHFHSP 226
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi11g0129 226 SUPERFAMILY RING/U-box 99 157 - -
Mibi11g0129 226 ProSiteProfiles Zinc finger RING-CH-type profile. 94 160 IPR011016 GO:0008270
Mibi11g0129 226 Pfam RING-variant domain 102 153 IPR011016 GO:0008270
Mibi11g0129 226 SMART ringv_2 101 154 IPR011016 GO:0008270
Mibi11g0129 226 PANTHER ZINC FINGER, RING-CH-TYPE 15 223 - -
Mibi11g0129 226 CDD RING_CH-C4HC3_MARCH 102 154 - -
Mibi11g0129 226 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 90 162 IPR013083 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi11g0129 Mibi-ChrMibi11 1990445 1993770 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi11g0129 64 225 C3H Transcription Factor Family AT5G05830 53.659 9.16e-56 175