Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi11g0128 ATGTCATCAACTATTCAGATATGCCGTGCAGATTTGGAACATGGCAGCGACTTGAGTGGTGAGGCTAGCATTAATCTCTCTGATGCCAATGATGGTAGAGATTGTAGGATTTGTCACATGGGTTTGGAGAGTGATAGGCATGTATATGGGGTTCCAATTGAATTGGGTTGTTCCTGCAAGAATGATCTTGCTGCTGCTCATAAACGCTGTGCTGAAATCTGGTTTAGGAGTCAAGGGAAGAGGACCTGTGAAATCTGTCATTCTGTGGCACGAAATGTTTTTGCAACAAATGGAGAGACTACTGAGAATTTAAGGGACAGCTACAATGCAATCACATCATCCACAACTCAACCACAAATTCCCCATAGATTTTGTGTAGATCGTCACTTTCTGGAATTATGTATTTTTATCATATTTTTCATCGCATTTATCATCACATATGCGTTCGCAAGTTTACTAGGCTAG 465 0.4086 MSSTIQICRADLEHGSDLSGEASINLSDANDGRDCRICHMGLESDRHVYGVPIELGCSCKNDLAAAHKRCAEIWFRSQGKRTCEICHSVARNVFATNGETTENLRDSYNAITSSTTQPQIPHRFCVDRHFLELCIFIIFFIAFIITYAFASLLG 154
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi11g0128 154 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 19 97 IPR013083 -
Mibi11g0128 154 Pfam RING-variant domain 35 86 IPR011016 GO:0008270
Mibi11g0128 154 ProSiteProfiles Zinc finger RING-CH-type profile. 27 93 IPR011016 GO:0008270
Mibi11g0128 154 PANTHER ZINC FINGER, RING-CH-TYPE 17 148 - -
Mibi11g0128 154 SUPERFAMILY RING/U-box 30 90 - -
Mibi11g0128 154 SMART ringv_2 34 87 IPR011016 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi11g0128 Mibi-ChrMibi11 1986246 1987051 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi11g0128 11 149 C3H Transcription Factor Family AT5G05830 42.361 7.15e-30 106
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi11g0128 11 1986246 1987051 Mibi11g0128 11 1986246 1987051 ECH