Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi11g0127 ATGGGTGCTCGTTGCTCCAAATTCTCCCTCTGCTGGTTCCACTCCCACCTCAAACCTTCTGTCCTTGAATCCTCCGACCTGGAAAATGGGGGGAAGAATGAGGGAGAAAAGTGGCCAAGTTTTGGGGAGTTTAGCTTGGAGCAATTGAAGGTTGCTACAAATGGATTCTCCTCTGAAAACATAGTGTCTGAGCATGGTGAAAAGGCTCCCAATGTTGTTTACAAAGGGAAGCTCGAGGATGGTCACATGATCGCCATCAAACGCTTCAACAAATTTGCTTGGCCTGATTCTCGCCAATTCCTTGATGAAGCTAAGCAAGTGGGGAGTCTGAGAAGTGAGAGATTAGCCAACTTGATTGGTTATTGCTATGAAGGGGAAGAAAGGCTGCTGGTAGCAGAGTTCATGCCACATGAAACTCTGGCTAAGCATCTCTTTCATTGGGAGGCACAACCCATGAAATGGGCAATGAGGTTGAGGGTGGCCTTGTACTTAGCTCAAGCTCTTGAGTACTGCAGCAGTAAAGGAAGGGCTTTATATCATGATCTCAATGCCTACAGGATCTTGTTTGATCAGGATGGTAATCCGAGGTTGTCTTGCTTTGGGCTCATGAAGAACAGCAGAGATGGCAAGAGTTACAGTACAAACTTGGCCTTCACACCACCCGAGTACTTGAGAACAGGTAGAGTGACACCAGAGAGTGTAGTTTACAGTTTTGGAACTTTGTTGCTTGATCTTCTGAGTGGCAAACATATTCCCCCAAGCCATGCACTTGATCTGATCCGGGGCAAAAACTTTTTGATGTTAATGGATTCTGCCTTAGAAGGCCACTTTTCGAAGGAGGATGGAACAGAATTGGTGCGGTTGGCTTCTCGTTGTTTACAGTATGAAGCTCGTGAGAGACCAAATGCAAAGTCTCTTGTTACATCTCTAATGTCACTTCAAAAAGAAACTGAGGTCCCTTCACATGTTTTGATGGGTATTCGGCAAGAAGCTGCATCTTCAACAAAGCCATCACTGACACCTTTTGGTGAAGCATGTTTGAGACTTGATCTTACTGCCATACATGAAATACTGGAGAAGATTGGTTACAAGGATGACGAGGGAATCGCCAATGAGCTTTCATTTCAATTGTGGACAAGTCAAATGCAGGAGACCCTGAACTTGAAGAAGCATGGAGATACTGCCTTCCGAGCCAAGGACTTTGTCACTGCTATTGACTGCTACACACAATTCATCGATGGAGGGACCATGGTCTCTCCTACTGTGCATGCGAGACGCTGCTTGTCTTATTTGATGAATGGGATGGCACAAGAAGCTCTTGGGGATGCAATGCAAGCCCAAGTGGTGTCACCTGAGTGGCCAACTTCTCTGTATCTTCAAGCAGCTTGTCTTTTCAGCCTTGGAATGGAGAATGATGCACAAGAAACTCTCAGAGATGGGACAAACATGGAAGCCAGAAAGAACAAAAATTTGAAAACTGTATAG 1485 0.4545 MGARCSKFSLCWFHSHLKPSVLESSDLENGGKNEGEKWPSFGEFSLEQLKVATNGFSSENIVSEHGEKAPNVVYKGKLEDGHMIAIKRFNKFAWPDSRQFLDEAKQVGSLRSERLANLIGYCYEGEERLLVAEFMPHETLAKHLFHWEAQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDQDGNPRLSCFGLMKNSRDGKSYSTNLAFTPPEYLRTGRVTPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSALEGHFSKEDGTELVRLASRCLQYEARERPNAKSLVTSLMSLQKETEVPSHVLMGIRQEAASSTKPSLTPFGEACLRLDLTAIHEILEKIGYKDDEGIANELSFQLWTSQMQETLNLKKHGDTAFRAKDFVTAIDCYTQFIDGGTMVSPTVHARRCLSYLMNGMAQEALGDAMQAQVVSPEWPTSLYLQAACLFSLGMENDAQETLRDGTNMEARKNKNLKTV 494
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi11g0127 494 FunFam probable serine/threonine-protein kinase At5g41260 136 327 - -
Mibi11g0127 494 Pfam Protein tyrosine and serine/threonine kinase 72 310 IPR001245 GO:0004672|GO:0006468
Mibi11g0127 494 Gene3D Transferase(Phosphotransferase) domain 1 136 328 - -
Mibi11g0127 494 FunFam probable serine/threonine-protein kinase At4g35230 31 134 - -
Mibi11g0127 494 SUPERFAMILY TPR-like 386 479 IPR011990 GO:0005515
Mibi11g0127 494 FunFam probable serine/threonine-protein kinase At4g35230 383 492 - -
Mibi11g0127 494 SUPERFAMILY Protein kinase-like (PK-like) 37 320 IPR011009 -
Mibi11g0127 494 Gene3D Phosphorylase Kinase; domain 1 31 134 - -
Mibi11g0127 494 Gene3D Tetratricopeptide repeat domain 382 494 IPR011990 GO:0005515
Mibi11g0127 494 PANTHER SERINE/THREONINE-PROTEIN KINASE BSK5 20 489 IPR045845 GO:0004672|GO:0009742
Mibi11g0127 494 ProSiteProfiles Protein kinase domain profile. 59 325 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi11g0127 Mibi-ChrMibi11 1981385 1985512 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi11g0127 44 310 Glycoside Hydrolase AT3G07070 35.593 2.32e-43 156
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-XII-1 Mibi11g0127 PK_Tyr_Ser-Thr 6.4e-26 CL0016