Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi11g0112 ATGGAGGAAGGTTTTGCCCCTTACCATGTTCCTCAACAAAGCCGGAGAGACAAGCTCAGAGTTGGCTTTCACGGCCAACTCCCCACGGCGGCGTGCGGCGGCGTACTCCAAGTCTCCGACGCTTCCCTTATTCCCTCCGATCTGCTAACAAACAATCCTCAAGCTTCAAATTTGCAAATAGACCCTTCAACTGTTCAAATTATCAACAACAACCCTTTTCTCAACTTCCCTCTCTCTCAAACCCTTCAAGCTGAGCCATTGTCTCTATCTCTCTCTTCCTCCCACAATCACTACTCTCATCAAGCCAATCTCAGCAGTAATCTTCAGAGATATGATGGTGGCTCTATGAGTAGCTCCCTTGTTCCTTTGGGCCCTTTCACTGGTTATGCTTCTGTGTTGAAGGGATCCAGGTTTTTGAAGCCTGCTCAGTTGTTGTTGGAGGAGGTTTGTGATGTTGGTGGTCGTGAAATTATCGCCGGCGAGAAGTTGGCGGCCGATGATTCGATGATGGAGCCTCCTCCGCCGTCCGATAGCCTCGGCTCCGGCGATGGCGGCGGCGAGGGTGGGAAGAAAAAGTCTAGACTGTTAACCATGCTTGATGAGGTGTACAGAAGGTACAGGCAGTACTATCAACAGATTCAAGCTGTAGTAACTTCATTTGAGTATGTTTCAGGCCTTGGTAACGCAGCCCCTTATGCAATCTTGGCTATAAATGCCATGACCAAGCATTTCAAATGCTTGAAGAATGTGATCATGGACCAGCTTCAGTTCACTAATAATAAGGCTCATTTTCACAATATAAGCAACAAAAAGGATGAATCTCCAAGGTTTGGAAATGTTGACCATAGAGGAGGAGGAGGAGGACCTTACAGCCAAATTAGGGATACGCACCCCGAATTGTTAGGAAACCAACCAATCTGGAGACCTCAACGTGGACTCCCCGAGCGTGCTGTGACCGTTCTTAGAGCATGGTTGTTTGAGCACTTTCTACACCCATATCCTACTGATACGGACAAGCTGATGCTGGCAAGACAGACCGGTCTGTCTCGTAGCCAGGTCTCAAACTGGTTCATTAATGCAAGAGTAAGGTTGTGGAAACCAATGGTTGAAGAAATACACATGCTAGAAACAAGACAGTCTCAAAAGAATCATCAGAACACAGAAGATCACAACAGGAAGGACAAGCCCAGCACAAGTGACAAGTTTCAACAAGATCATGACGCTCCTTTCAAACGCACCAGAAATTATGAACCTACGACGACTCATGATATGTCGGCGACAAATCATCAGCTGCCATGTAATGCTGTAAGCAATGTTGGTAGTAATAATAATCAGACGGTGAGTGTCGGAGGAACGGTGGCCAATAGTGTCTCGCTTACGCTTGGTCTCCACCAGAACCATGGTGGTCTTGCTCTATCTGAACCTTTCCCCATGAGTGAAGCTCTTCGTTTTGGCCTTGCCTTAGAAGTACCCAGCAATGAAGAGTATGTAATGAGTGGTTCTGAATCTCAGAATCGGCATTATGGAAGAGATCATCAAGTGATTGGAGGGCAACTTGTGCATGACTTTGTTGGGTAA 1578 0.4689 MEEGFAPYHVPQQSRRDKLRVGFHGQLPTAACGGVLQVSDASLIPSDLLTNNPQASNLQIDPSTVQIINNNPFLNFPLSQTLQAEPLSLSLSSSHNHYSHQANLSSNLQRYDGGSMSSSLVPLGPFTGYASVLKGSRFLKPAQLLLEEVCDVGGREIIAGEKLAADDSMMEPPPPSDSLGSGDGGGEGGKKKSRLLTMLDEVYRRYRQYYQQIQAVVTSFEYVSGLGNAAPYAILAINAMTKHFKCLKNVIMDQLQFTNNKAHFHNISNKKDESPRFGNVDHRGGGGGPYSQIRDTHPELLGNQPIWRPQRGLPERAVTVLRAWLFEHFLHPYPTDTDKLMLARQTGLSRSQVSNWFINARVRLWKPMVEEIHMLETRQSQKNHQNTEDHNRKDKPSTSDKFQQDHDAPFKRTRNYEPTTTHDMSATNHQLPCNAVSNVGSNNNQTVSVGGTVANSVSLTLGLHQNHGGLALSEPFPMSEALRFGLALEVPSNEEYVMSGSESQNRHYGRDHQVIGGQLVHDFVG 525
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi11g0112 525 SUPERFAMILY Homeodomain-like 309 374 IPR009057 -
Mibi11g0112 525 FunFam BEL1-like homeodomain protein 9 310 372 - -
Mibi11g0112 525 SMART prehox3 127 253 IPR006563 -
Mibi11g0112 525 Gene3D - 310 372 - -
Mibi11g0112 525 ProSiteProfiles 'Homeobox' domain profile. 304 367 IPR001356 GO:0003677
Mibi11g0112 525 Pfam Associated with HOX 132 251 IPR006563 -
Mibi11g0112 525 MobiDBLite consensus disorder prediction 164 191 - -
Mibi11g0112 525 CDD homeodomain 307 368 IPR001356 GO:0003677
Mibi11g0112 525 SMART HOX_1 307 371 IPR001356 GO:0003677
Mibi11g0112 525 Pfam Homeobox KN domain 324 363 IPR008422 GO:0003677|GO:0006355
Mibi11g0112 525 MobiDBLite consensus disorder prediction 377 428 - -
Mibi11g0112 525 PANTHER HOMEOBOX PROTEIN TRANSCRIPTION FACTORS 90 391 - -
Mibi11g0112 525 MobiDBLite consensus disorder prediction 377 418 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi11g0112 Mibi-ChrMibi11 1685973 1690761 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi11g0112 1 525 Homeobox Transcription Factor Family AT5G02030 44.221 6.18e-111 340
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-BELL Mibi11g0112 POX 2.1e-33 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi11g0112 11 1685973 1690761 Mibi11g0112 11 1685973 1690761 ECH