Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi11g0109 ATGGCTCAATGGTCAGGAAGAAGCGGTTTGGTTGGAGACTACATCGTCGGGAAGCAAATTGGGTCTGGTTCTTTCTCTGTGGTTTGGCATGGGAGGCATCGAGTTCATGGAACTGAGGTTGCCATTAAAGAGATCGCCACTGGTAGGCTTAACAAGAAGTTGCAGGAGAGTCTCATGTCTGAGATTTTCATCTTGAAGCAGATTAATCATCCTAATATAATTCACTTGCACGATATAATTGAGGTTCCTGGGAAGATACATCTTGTGTTAGAGTATTGTAGAGGAGGTGATCTCTCTATGTATATACAGCGCCAAGGAAGAGTCCAAGAAGGAACTGCAAAGCATTTTATGCAACAGCTAGCTACTGGCCTTCAAGTTCTTCGAGATAATAATCTTATTCATAGAGATTTGAAACCACAGAATCTTCTCCTCACCAGAAATGATGACAAGTCAGTTCTGAAGATTGCTGATTTTGGATTCGCAAGATCTCTGCAACCTAGGGGTCTTGCAGAAACCATGTGTGGTTCACCTCTCTACATGGCTCCAGAAATTATGCAACAACAGAAGTATGACGCCAAGGCAGACCTCTGGAGTGTGGGTACGATCTTATTTCAGCTTGTTACAGGAAGAACACCATTTACTGGGAATTCTCAACCGCAGTTACTACAGAACATTATGAAATCAACTGAACTGCCGTTCCCATCTGATAATCAAAGTCTGAGTTCTGAGTGTAAAGATTTATGTCAGAAATTGCTGCGACGTAGTCCAGTGGAACGGCTTACTTTTGAAGAATTTTTTAATCATCCATTTCTTTGTCAGAAGCAGCCAGAACAGGATAGATCATTGAGACGTGCAAGTTCTTCAAGGATGGTAGGTGAAATTTGCTCAACAGAGCCCAATCCTTTCAGAAGGAACAAGGAAAATCATCAGGAGGACTGCTTACCTTTCTTTTTGGATGATGATACTCGTGGTCCTGAGGGAAGTCCATCTTTTCCGAGGAAGAAATCCTCAATAAAGTCTACGTATGGATTTGACCTTACTACACAGCAAGATAGAGCAGGCGCAGCATTTGCTAGTTCTACTAACGTAAATTTTACTCCCCGCCAGCAACCTGAAAAAAGTGCTATAAGGTTGGAGGGCCTTAGAACCTCAGCAAGTAATCTCGCTGATCCGCTAGGGTCTCTAGAACAGAGATTGGCAAACACTAGTTCAAGAGTTGCAGACTCACTTGAGAATATTGATCAAGATTATGTTCTTGTGTCTGGACCTCCTATGGATGTCTCATCATCTTCTGTGAGTGCTTCAAAGCCTAGCCATTTTCCATATAGATCAGGTGCCTCCCTACAGGAGTCTTCTAATTTAATTGATAGAGTAAGTTCTCCGATGCCAATAATTGGTGCTGCTACCAGTAGCACATATCAAATTGGAAGTTCAGAAAGTCAGGACTCTGGTCCAGGGACTTCACCTGCGTCAATGGATACAGGAGATGAGCAGCCATCAGCTGACTGCATGACCAGAATAAAATCATTGCAACAGTGTGCATCCGCCATAACTGAATTAGTTCACGAAAAGATAGAGGCTAGAAAGCAGCTGGAAGCATTCTCCATTCAGCTCGTCATTCTTGCAATTTGGAAGCAAGCACTACACATATGTCATGCACAGGCTGCCTCTGCCATGGAAGGAAGTCCGAGTCAAGAAACAACTAGATGTAGGAGGAGCACCAACATGAAGCATGGCAGTTCTGATTCAGAAGAATGCCTTGATGGAAATGTGCAAGGGCCAAAGGATATTCTATCTCAGATTGAAAGTGAATTTCTGAGGGAAATTGAACTTGCTGAAGAATTTGCGAAGGCTGTTGAGCCTGCAAATACAGAGATGCCAGATGCTATGGAGACAATATTTCAGTCTGCTCTTGCTTTTGGGAGACATGGGGGTGTAGAAGAGCTCATGGGTGAAATGGATAGTGCAGCTGCATTGTATTCAAAAGCTGTGCAACTATTGGTGTTTCTTCTAGTGGAAGCTCCATCCCTCATTCTAAATCCTCCATTTACACTGACTAACACGGATCGATACAGGCTTCGGACTTATATCGATCTTCTAAACAACAGGCAAGGCTATTCCAGGTCTCAGCGAATGGCGCTGCTGAAATGTGACGAAGCCCAAGGCAGGCTTAAGAACAAGTTTTAG 2187 0.4339 MAQWSGRSGLVGDYIVGKQIGSGSFSVVWHGRHRVHGTEVAIKEIATGRLNKKLQESLMSEIFILKQINHPNIIHLHDIIEVPGKIHLVLEYCRGGDLSMYIQRQGRVQEGTAKHFMQQLATGLQVLRDNNLIHRDLKPQNLLLTRNDDKSVLKIADFGFARSLQPRGLAETMCGSPLYMAPEIMQQQKYDAKADLWSVGTILFQLVTGRTPFTGNSQPQLLQNIMKSTELPFPSDNQSLSSECKDLCQKLLRRSPVERLTFEEFFNHPFLCQKQPEQDRSLRRASSSRMVGEICSTEPNPFRRNKENHQEDCLPFFLDDDTRGPEGSPSFPRKKSSIKSTYGFDLTTQQDRAGAAFASSTNVNFTPRQQPEKSAIRLEGLRTSASNLADPLGSLEQRLANTSSRVADSLENIDQDYVLVSGPPMDVSSSSVSASKPSHFPYRSGASLQESSNLIDRVSSPMPIIGAATSSTYQIGSSESQDSGPGTSPASMDTGDEQPSADCMTRIKSLQQCASAITELVHEKIEARKQLEAFSIQLVILAIWKQALHICHAQAASAMEGSPSQETTRCRRSTNMKHGSSDSEECLDGNVQGPKDILSQIESEFLREIELAEEFAKAVEPANTEMPDAMETIFQSALAFGRHGGVEELMGEMDSAAALYSKAVQLLVFLLVEAPSLILNPPFTLTNTDRYRLRTYIDLLNNRQGYSRSQRMALLKCDEAQGRLKNKF 728
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi11g0109 728 CDD STKc_ATG1_ULK_like 20 270 - -
Mibi11g0109 728 SMART serkin_6 14 271 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi11g0109 728 Pfam Protein kinase domain 15 271 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi11g0109 728 PANTHER SERINE/THREONINE-PROTEIN KINASE UNC-51-RELATED 6 637 IPR045269 GO:0004674|GO:0006914
Mibi11g0109 728 ProSitePatterns Protein kinases ATP-binding region signature. 20 43 IPR017441 GO:0005524
Mibi11g0109 728 Gene3D Transferase(Phosphotransferase) domain 1 7 316 - -
Mibi11g0109 728 FunFam Serine/threonine-protein kinase ATG1 6 312 - -
Mibi11g0109 728 SUPERFAMILY Protein kinase-like (PK-like) 11 272 IPR011009 -
Mibi11g0109 728 FunFam Aurora kinase A 7 96 - -
Mibi11g0109 728 ProSitePatterns Serine/Threonine protein kinases active-site signature. 132 144 IPR008271 GO:0004672|GO:0006468
Mibi11g0109 728 ProSiteProfiles Protein kinase domain profile. 14 271 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi11g0109 728 MobiDBLite consensus disorder prediction 473 500 - -
Mibi11g0109 728 MobiDBLite consensus disorder prediction 473 495 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi11g0109 Mibi-ChrMibi11 1425473 1433138 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi11g0109 10 273 CBL-interacting serine-threonine protein kinases AT2G30360 35.556 1.42e-51 184
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK Group-Pl-3 Mibi11g0109 Pkinase 1.2e-72 CL0016