Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi11g0082 ATGGAAGAAGAAGGTCAATGTTGGATTTGGACAAAGAGAAAGCACTCATCTTTGAGCTCTTATAGTAACAATAATACTGATCTTGCTTCACCAACTGATCACAAGTTCAGCTATGGCGGCGATTCATGGGAAGAACAAGCTTTTGCAGAAGATGAGCGTCTTGGTGGCTGTGTTTGGCCTCCAAGATCATATTCTTGCAGCTTTTGTAGCAGAGAGTTCAGGTCAGCTCAAGCTCTAGGTGGCCACATGAATGTTCACAGAAGAGATAGAGCTAGGCTAAAGCAAACCCCAAGTCCACACAAACATGATGAAACCACCACTTTTGATCTTCATCATCAAAATTCTTTCTCATCTTCTTCTCTCCCTTATTATTCCAACACTAACCCTAATTCTGATTATCATCACCATCTTGAGGTTAAATTAGCCCCTCCTCCTTCTTTGATTCACAATAATTCTCCTTCATATGATTCTTGTATTTCATGGTCAACCTTTGCTAAACAAAGATTATATTCTCGAAAGGTCGATCTTATTGGAACTGAAGATAAGACGATGTCTAAGATAATAGATATTGATTGTAATAAGGAAGAAAGTAATACTATGAGCTGCAAAAGGAGAAAAATAACAGATTATTCATCATCAATTCCAGCTGATAATAGGCATGATCATATCAAGTCTCGAATGTTCGAGTTTATTAGTCCTAGTTCCATTATTGAAGAGCTAGATCTGGAGCTAAGGCTTGGTCATAGCCCTCCCAAGGTATAG 762 0.3858 MEEEGQCWIWTKRKHSSLSSYSNNNTDLASPTDHKFSYGGDSWEEQAFAEDERLGGCVWPPRSYSCSFCSREFRSAQALGGHMNVHRRDRARLKQTPSPHKHDETTTFDLHHQNSFSSSSLPYYSNTNPNSDYHHHLEVKLAPPPSLIHNNSPSYDSCISWSTFAKQRLYSRKVDLIGTEDKTMSKIIDIDCNKEESNTMSCKRRKITDYSSSIPADNRHDHIKSRMFEFISPSSIIEELDLELRLGHSPPKV 253
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi11g0082 253 ProSiteProfiles Zinc finger C2H2 type domain profile. 64 91 IPR013087 -
Mibi11g0082 253 SUPERFAMILY beta-beta-alpha zinc fingers 61 90 IPR036236 -
Mibi11g0082 253 ProSitePatterns Zinc finger C2H2 type domain signature. 66 86 IPR013087 -
Mibi11g0082 253 Pfam C2H2-type zinc finger 64 88 - -
Mibi11g0082 253 PANTHER OS07G0101800 PROTEIN 40 250 - -
Mibi11g0082 253 SMART c2h2final6 64 86 IPR013087 -
Mibi11g0082 253 Gene3D Classic Zinc Finger 60 119 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi11g0082 Mibi-ChrMibi11 1122922 1123683 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi11g0082 44 253 C2H2 Transcription Factor Family AT5G06070 38.991 5.37e-28 105
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Mibi11g0082 zf-C2H2_6 1e-06 CL0361
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi11g0082 11 1122922 1123683 Mibi11g0082 11 1122922 1123683 ECH