Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi11g0081 ATGGAATTTAATCGTCAAAGCACAAAGAAGATATCTGAACAGGCAAGATGGAGCCCGGAAGAATCTGGAACAAGATCTTATACTTGTGCGTTTTGCAAGAGAGGATTCTCAAATGCTCAAGCCCTAGGGGGTCACATGAACATCCATAGAAGAGATAGAGCAAAGCTCAAACAATCGTCTGAGGAAAACTTGCTTTCTCTTGACATCTCAATCAAGAACCCAACTAGTACTTGTACTTCTGAAGATGATGATGATGATCAGCCTCCTCCTAATTTTAAGGCTCCTAATTCAGAGGAGAAGGTTTTGTTCCAGTGGGATTCTGAAACACTCCCTAATAATCCCTTTTTTGCTGGGAATAATGAGGAGAACACTGAAATAGATCTTGAGCTTCGGTTAGGTCATCAACCACATGAGGCCTCAACTTTGAGCACCCGAGAATTTTTTTGA 447 0.4139 MEFNRQSTKKISEQARWSPEESGTRSYTCAFCKRGFSNAQALGGHMNIHRRDRAKLKQSSEENLLSLDISIKNPTSTCTSEDDDDDQPPPNFKAPNSEEKVLFQWDSETLPNNPFFAGNNEENTEIDLELRLGHQPHEASTLSTREFF 148
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi11g0081 148 ProSitePatterns Zinc finger C2H2 type domain signature. 29 49 IPR013087 -
Mibi11g0081 148 MobiDBLite consensus disorder prediction 1 24 - -
Mibi11g0081 148 ProSiteProfiles Zinc finger C2H2 type domain profile. 27 54 IPR013087 -
Mibi11g0081 148 SUPERFAMILY beta-beta-alpha zinc fingers 23 53 IPR036236 -
Mibi11g0081 148 MobiDBLite consensus disorder prediction 10 24 - -
Mibi11g0081 148 MobiDBLite consensus disorder prediction 52 97 - -
Mibi11g0081 148 Gene3D Classic Zinc Finger 4 85 - -
Mibi11g0081 148 PANTHER OS07G0101800 PROTEIN 9 89 - -
Mibi11g0081 148 MobiDBLite consensus disorder prediction 60 77 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi11g0081 Mibi-ChrMibi11 1096446 1096976 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi11g0081 24 133 C2H2 Transcription Factor Family AT3G09290 38.806 2.70e-19 77.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Mibi11g0081 None None None