LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Mibi11g0064	ATGGAGGAAGCTTTAAGGTCATCAGGTTGGTCAGAAGAAGAGGAGTTTGTGAGAAAGCTTTTAGAGGAAGGGTCTGATAACAATGCTGTGGTCACAGAAGATACATCATTTGATCAGAATTACTATATGAGAAAATCATCAAGTGAGGAACAAGCCATTATTAATAGGTTCGTCTCCAACATCTACTCAGGACCTACCATTTCTGATATTGAGAATGCCTTATCACTCACTTCCCACGACCAAACACACCAACTCTCTTCACCACCCAGAGTTTGCATAATGGGAAGAGGTTTGAATATGAGCAGGAGTGAGAATAAGTATAGCTTGAAAATCAAGTGCTATGGCAATGGATTGAGTGATGATGGATACAAGTGGAGGAAGTATGGACAGAAATCTATCAAGAACAGCCCAAATCCTAGGAGCTACTATAGGTGCACAAACCCAAGGTGTAACGCCAAGAAGCAAGTAGAAAGATCCAGCGAAGAGCCAGACACTGTTATTGTCACCTATGAAGGGCTCCATCTTCACTTTGCTTACCCATATTTCATCATGGGCCAACCACATCATCAAGCCCATCCACCATCGAAGAAGTCTAGGCCTATCTATTCACAAGCCCAATCCCATGATGAAGCCCAAGAATGTCCAGAAGCTCATATGGGCCAAAAGCCCAGATATGTGGATGTTCCCTTAGCCCCTACAGAAAACATGGGTCCACAAGGATTGCTTGAAGACATGGTGCCATGGATGATAAGGAACCCCAGTATTAGCAAACCATCAAATTTTTGCTCATCTTCTTCATATCATTTTAATTACTCCACCTCCTCTCACCCTATTGCCTTCGATTCTAGCATTTAA	855	0.4269	MEEALRSSGWSEEEEFVRKLLEEGSDNNAVVTEDTSFDQNYYMRKSSSEEQAIINRFVSNIYSGPTISDIENALSLTSHDQTHQLSSPPRVCIMGRGLNMSRSENKYSLKIKCYGNGLSDDGYKWRKYGQKSIKNSPNPRSYYRCTNPRCNAKKQVERSSEEPDTVIVTYEGLHLHFAYPYFIMGQPHHQAHPPSKKSRPIYSQAQSHDEAQECPEAHMGQKPRYVDVPLAPTENMGPQGLLEDMVPWMIRNPSISKPSNFCSSSSYHFNYSTSSHPIAFDSSI	284

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Mibi11g0064	284	PANTHER	WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED	51	208	IPR044810	GO:0003700
	Mibi11g0064	284	MobiDBLite	consensus disorder prediction	188	222	-	-
	Mibi11g0064	284	Pfam	WRKY DNA -binding domain	120	176	IPR003657	GO:0003700\|GO:0006355\|GO:0043565
	Mibi11g0064	284	SUPERFAMILY	WRKY DNA-binding domain	117	176	IPR036576	GO:0003700\|GO:0006355\|GO:0043565
	Mibi11g0064	284	Gene3D	WRKY domain	109	178	IPR036576	GO:0003700\|GO:0006355\|GO:0043565
	Mibi11g0064	284	Coils	Coil	284	284	-	-
	Mibi11g0064	284	SMART	WRKY_cls	119	178	IPR003657	GO:0003700\|GO:0006355\|GO:0043565
	Mibi11g0064	284	ProSiteProfiles	WRKY domain profile.	114	179	IPR003657	GO:0003700\|GO:0006355\|GO:0043565
	Mibi11g0064	284	FunFam	WRKY transcription factor	104	180	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Mibi11g0064	Mibi-ChrMibi11	840804	843433	Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Mibi11g0064	41	252	WRKY Transcription Factor Family	AT5G43290	42.616	3.09e-48	160

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	TF	WRKY	Mibi11g0064		WRKY	1e-25	CL0274