Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi11g0059 ATGGTGTTGCAGAAGAATTTGAACTACAGTTTTAATGGCTATCAAGTGCCTGTCGTTCCTAGAGCATCAAGAACAACTAGGGGGAGGGGTGCATTCAAGAAGAAGAGTGGGGGCAGTCAGATACAAGCTTTTGAAATTTTGGCTAGTGTAGCCGGCAACTTCCTGCGGGAGAATGAAAACTCCAAGGCTGACGATGCTGTGGCTGGAAAGGACCCTGTTGGTTTTGTTGGAATTAACATAAAGGATAAACAAGAGGAAGAAGCTAGGTCTTTTAAGAGTGACCTCTTCGAGTATGGATGTTGCAGTGAGAATGCCTCAGGCCTGGTCGTTAATTTGCATGGCAAGCATAATGATCAAAGGATTGAAGGCTGTTTATCTTTTCTTGGCAATCGTCTTGAAGCCCAAAGACAAACTGTGTTTGAGAAGGAAGCAGGTAGACTGATGAAAAAGAATTGTATCAATGAGAGAGTTGTTCATGTTACTGAAAGCTCTGCTGGAGTGACAGAATCTGGCCACAGGGCTTCTAATCGGGAAAGTTCAGAAAATTCCGTCGAGAAGCCTTCATTGGAAGGTCTTGTGCATGGTTCCAGTGGTAGGAGATTATTTAATAGAGATGATGACGAAAACTTTGTTAGGTGTACTCAACCAAGCTCTAAGAATAAGATTTCTGGCCCCCTCCCAGATTTGTCTTTTCAACGTGTGAATAGTGTTTCTGCATCTAAAAGTTGTGATGTAGGACAAAAGTCAAAGAATGGGAGTTTGTATAGAAGTGATGACAGTATTAGTAGAGATAATTATATGCTTGAAAGCTCACAGAGGATGTATCCTTTTAAGAAGAGGAAGTTCTTCAACCAGACCTCATCATCTACATCTGATAGGGGGTCTCGTTGTCATGGCATATTTGATTCCTCTGACACCAGAGTTGATGATGTGAACTTCAGTGCAGCAATTGGAGCATCATCCTCTATAGCTGGTCAACAAGTACATACTGGGTCAAGGGATTGTAATGTGAAGCTTAGCATCAAATCTTTTAAAGTCCCAGAGCTTTTTATTGATATCCCTGAAACTGCAACCATTGGTTCATTAAAGAGGACAGTTATGGAGGCAGTGACGACTATTTTAGGAGAGGAGCTGCGTGTAGGTATTCTTCTTCAGGGAAAGAAGGTCCAAGATGATAGCAAAACTCTAATTCAGACTGGGATTTCTCAAGATGATAAACACAATAGATTGGGGTTCATGTTGGAGCCGAGACATACTAAAGTTACACCAACTTCATATAATGAAGACCCTTCTTTTCAGACCACCAGTTCGCACAGGGATATATCCAGGAAACCTACATCTTTGGTGCTAAAACAAAGAACTTATAATATCTCCCAAGAGCATTCCCTGATTAAATTTGAAAGTTGTGGTGAAGGTGACCTAAACATGGTCCCCTCTCTAGCAGACACTTCCCCTAACAATACCATGTCAAAGTGTCGTGCTCTAGTCACAGTTCCAGCTATTAACATGGAGGCATTAGCTGTCATTCCCTTCCGTCGCAAGCCTGGAAATCCTGACTTTGTGCAGCGCCGAATCAGGAGGCCTTTCTCTGTGTCTGAAGTAGAAGCGCTGGTTCAGGCAGTTGAAAAACTAGGAACTGGAAGATGGCGTGATGTCAAACAGTGTGCCTTTGACAGTGCAAAGCACAGGACTTACGTGGATTTGAAGGATAAGTGGAAGACATTAGTGCACACTGCAAGAATCTCCCCTCAGCAAAGGAGAGGTGAACCTGTTCCTCAGGAGCTCTTGGACAGAGTCTTAGCTGCTCATGCCTATTGGTCTCAACAGCAATGTAAGCATCAGGTTAAGCCTCTTTGA 1857 0.4303 MVLQKNLNYSFNGYQVPVVPRASRTTRGRGAFKKKSGGSQIQAFEILASVAGNFLRENENSKADDAVAGKDPVGFVGINIKDKQEEEARSFKSDLFEYGCCSENASGLVVNLHGKHNDQRIEGCLSFLGNRLEAQRQTVFEKEAGRLMKKNCINERVVHVTESSAGVTESGHRASNRESSENSVEKPSLEGLVHGSSGRRLFNRDDDENFVRCTQPSSKNKISGPLPDLSFQRVNSVSASKSCDVGQKSKNGSLYRSDDSISRDNYMLESSQRMYPFKKRKFFNQTSSSTSDRGSRCHGIFDSSDTRVDDVNFSAAIGASSSIAGQQVHTGSRDCNVKLSIKSFKVPELFIDIPETATIGSLKRTVMEAVTTILGEELRVGILLQGKKVQDDSKTLIQTGISQDDKHNRLGFMLEPRHTKVTPTSYNEDPSFQTTSSHRDISRKPTSLVLKQRTYNISQEHSLIKFESCGEGDLNMVPSLADTSPNNTMSKCRALVTVPAINMEALAVIPFRRKPGNPDFVQRRIRRPFSVSEVEALVQAVEKLGTGRWRDVKQCAFDSAKHRTYVDLKDKWKTLVHTARISPQQRRGEPVPQELLDRVLAAHAYWSQQQCKHQVKPL 618
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi11g0059 618 ProSiteProfiles Myb-like domain profile. 521 576 IPR001005 -
Mibi11g0059 618 SUPERFAMILY Homeodomain-like 527 608 IPR009057 -
Mibi11g0059 618 MobiDBLite consensus disorder prediction 163 198 - -
Mibi11g0059 618 MobiDBLite consensus disorder prediction 420 440 - -
Mibi11g0059 618 ProSiteProfiles Ubiquitin domain profile. 337 405 IPR000626 GO:0005515
Mibi11g0059 618 PANTHER TELOMERIC REPEAT BINDING PROTEIN 1 167 IPR031105 -
Mibi11g0059 618 SMART sant 525 578 IPR001005 -
Mibi11g0059 618 Pfam Myb-like DNA-binding domain 526 575 IPR001005 -
Mibi11g0059 618 Gene3D - 517 617 - -
Mibi11g0059 618 CDD SANT_TRF 527 577 - -
Mibi11g0059 618 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 522 580 IPR017930 -
Mibi11g0059 618 SUPERFAMILY Ubiquitin-like 332 405 IPR029071 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi11g0059 Mibi-ChrMibi11 776543 780442 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Mibi11g0059 None None None
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi11g0059 11 776543 780442 Mibi08g1213 08 27519297 27522828 ECH
Mibi11g0059 11 776543 780442 Mibi11g0059 11 776543 780442 ECH