Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi11g0053 ATGGCTGATCCCTACCCTTATTCCCTTCTCCATTTCCCGCAACTCATAGCAGCTGTAGGAACAAGAACCACCCACCATGCTTATTCGCCGGAGCCGCCGCCACCACCACCTACTAGTAATAACAGCTTCAACTTGCAGGTTTTGTCTCATGATGAGTTTTCTCCTTCAAATCATCATGGAGACTATTCCTCCACAAACCCTACTATTGTTTCTTCTGCTTTGGTGAATCATGGCACTACTGCTACTTCTACTGCATTCTGTAGCAGCATGAAATCTGAAGAAAAGGGGTGGCTTGGATTTGATGATATTCCCAATCATCGATGGCCAAGACAAGAGACTTTATTGCTCTTAGAGATCAGATCTCGTCTTGATTCTAAGTTCAGACAGACCAATCATAAAGCCCCCTTATGGAATCAAATTTCTAGGATAATGAGTGAAGAATATGGGTACCAAAGAAGTGGGAAGAAATGCAAAGAGAAGTTTGAGAATTTGTACAAGTATTACAAGAAGACCAAGGGAGGAAAGGCAGGAAGACAAGATGGGAGACACTACAGATTCTTTCGTCAGCTTGAAGCAATATGTGGAGAATCATCATCAACAACGAACATTACTACTACTACTACTTCTGCTGACAATAATAATAATTACCATCAACCTCCAGTAATGACCTTCACAGATAATGGTGAAGAAGTTCTAATTCATGACAACATCATCAACAACTACAATTCATCAGATCAGTTGGAGACATCCTCGTCTGAATACAATGATAACAACAATAATAATAATGACATGTCAGCCATGAGTTATATGATGATGAAGAAGCAGAAAGAGGTAATGGAGATAGAGAAGAAAAGAGAGAGGGTGGTGAGGAAGAGTATGAGGGTTGAGGTTGAAGAGATAGTGGAGTCTCACATGAGGAACATTATAGAGACTCAAGAAGCTTGGATGGAGAAGATGATGAGTGTTGTTGAGAATAGAGAGCAAGAAATAATGTATAAGGAAGAAGAGAGGATGAGAGATTCAACGAGATTTGATCAACAAGTTCATCAACTGTGGGCTAAAGAGAGAGCTTGGATTGCAACAAGAGACGCTGCATTGATGGAGGTAGTGAAGGAACACTTGGATAAAGAAAACCTAACAACAACCGATCATCTTCATCATAATCATCAGCCGATGGTTTTTAAAGAATATGAAGAAGAAGAAGAACCACAAAGCAAGAACAATATAATGGTGGGTGGACAGAACTGGAGATCTCAAATCTATAATCTGAAATAG 1275 0.4 MADPYPYSLLHFPQLIAAVGTRTTHHAYSPEPPPPPPTSNNSFNLQVLSHDEFSPSNHHGDYSSTNPTIVSSALVNHGTTATSTAFCSSMKSEEKGWLGFDDIPNHRWPRQETLLLLEIRSRLDSKFRQTNHKAPLWNQISRIMSEEYGYQRSGKKCKEKFENLYKYYKKTKGGKAGRQDGRHYRFFRQLEAICGESSSTTNITTTTTSADNNNNYHQPPVMTFTDNGEEVLIHDNIINNYNSSDQLETSSSEYNDNNNNNNDMSAMSYMMMKKQKEVMEIEKKRERVVRKSMRVEVEEIVESHMRNIIETQEAWMEKMMSVVENREQEIMYKEEERMRDSTRFDQQVHQLWAKERAWIATRDAALMEVVKEHLDKENLTTTDHLHHNHQPMVFKEYEEEEEPQSKNNIMVGGQNWRSQIYNLK 424
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi11g0053 424 Pfam Myb/SANT-like DNA-binding domain 106 193 IPR044822 -
Mibi11g0053 424 Coils Coil 271 291 - -
Mibi11g0053 424 CDD GT1 107 164 - -
Mibi11g0053 424 Gene3D - 108 170 - -
Mibi11g0053 424 PANTHER FI21293P1 61 374 - -
Mibi11g0053 424 MobiDBLite consensus disorder prediction 23 44 - -
Mibi11g0053 424 FunFam Trihelix transcription factor GT-2 108 170 - -
Mibi11g0053 424 ProSiteProfiles Myb-like domain profile. 107 165 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi11g0053 Mibi-ChrMibi11 694984 697155 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi11g0053 107 371 Trihelix Transcription Factor Family AT5G03680 44.569 1.46e-66 221
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Mibi11g0053 Myb_DNA-bind_4 3.3e-19 CL0123