Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi11g0049 ATGATTTGACAGGCAAGGATTATTTTGTCTGCCTTCTTTTGGGATTTGCACTTGGAAATGAAGGAGAGGCAACGTTGGAGAGCTGAGGAGGACGCATTATTACGAGCTTATGTCAAACAGTATGGTCCTAGGGAATGGAATCTTGTGTCCCAGCGCATGAATACACCCCTTAATAGGGACGCCAAATCCTGTTTAGAAAGGTGGAAGAACTACCTCAAGCCTGGCATCAAGAAGGGATCTCTCACTGAAGAAGAACAACGACTTGTCATCCGACTTCAGGCAAAACACGGCAATAAATGGAAGAAAATTGCTGCAGAAGTCCCAGGTCGCACTGCTAAGAGGTTAGGTAAGTGGTGGGAAGTATTTAAAGAGAAGCAGCAGAGGGAAAAGAAAGAGATCAATAAAACAGTGGACCCAATTGACGACACTAAGTACGATCATATACTTGAGACTTTTGCTGAGAAGCTGGTCAAAGAACGCCCTTCTCCATCCTACCTTATGGCTGCTTCCAATGGAGCTTTTATTCACACTGATGCATCGGCTCCTACATCAGCTATGCTTCCTCCATGGCTTTCAAACTCCAATAACTCCGCGGCTATTAGGCCACCTTCTCCTTCTGTGACGCTGAGCCTCTCTTCCTCAACTGTAGCTGCTCCGCCTCCATTTCAATGGTTACAACCTGAGAGAGCTCCAGAAAATGCTTCTCTTGTTATAGGGAATGTAACACCTCACGGAACTAATTCAGCTTTTGGTGATAACATGTTTGTATCTGAGCTAATTGAGTGCTGTAAAGAGTTGGAAGAAGGGCATCGGGCATTGTCATCCCATAGGAAGGAAGCTGCGTGGAGGTTAAGGCGGGTGGAGTTGCAGTTAGAGTCAGAGAAGGCATGTCGGAGGCGGGAGAAGATGGAAGAGATTGAAATGAAGATTAAAGCCCTCCGGGAAGAAGAGAAGGCTGCTTTGGACAGAATTGAGGCTGAATACAGGGAGCAGCTAGCTGGGCTGAGAAGAGATGCAGAAAGCAAGGAGCAGAAGTTGGCTGAGCAGTGGGCTGCTAAGCACTCGAAGCTTAGTAAGTTTCTAGAGCAAACTGGGTGCAGAACCAGGCTTGCTGAGCCAAATGGAAGATAA 1131 0.4677 MIXQARIILSAFFWDLHLEMKERQRWRAEEDALLRAYVKQYGPREWNLVSQRMNTPLNRDAKSCLERWKNYLKPGIKKGSLTEEEQRLVIRLQAKHGNKWKKIAAEVPGRTAKRLGKWWEVFKEKQQREKKEINKTVDPIDDTKYDHILETFAEKLVKERPSPSYLMAASNGAFIHTDASAPTSAMLPPWLSNSNNSAAIRPPSPSVTLSLSSSTVAAPPPFQWLQPERAPENASLVIGNVTPHGTNSAFGDNMFVSELIECCKELEEGHRALSSHRKEAAWRLRRVELQLESEKACRRREKMEEIEMKIKALREEEKAALDRIEAEYREQLAGLRRDAESKEQKLAEQWAAKHSKLSKFLEQTGCRTRLAEPNGR 376
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi11g0049 376 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 73 127 IPR017930 -
Mibi11g0049 376 Gene3D - 23 77 - -
Mibi11g0049 376 Gene3D - 81 139 - -
Mibi11g0049 376 PANTHER PROTEIN ROUGH SHEATH 2 HOMOLOG 20 371 - -
Mibi11g0049 376 ProSiteProfiles Myb-like domain profile. 73 123 IPR001005 -
Mibi11g0049 376 Pfam Myb-like DNA-binding domain 26 87 - -
Mibi11g0049 376 SUPERFAMILY Homeodomain-like 23 117 IPR009057 -
Mibi11g0049 376 SMART sant 77 125 IPR001005 -
Mibi11g0049 376 SMART sant 22 74 IPR001005 -
Mibi11g0049 376 CDD SANT 25 72 IPR001005 -
Mibi11g0049 376 FunFam MYB-related transcription factor 23 77 - -
Mibi11g0049 376 CDD SANT 82 123 IPR001005 -
Mibi11g0049 376 ProSiteProfiles Myb-like domain profile. 18 72 IPR001005 -
Mibi11g0049 376 Coils Coil 303 345 - -
Mibi11g0049 376 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 18 72 IPR017930 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi11g0049 Mibi-ChrMibi11 667490 669218 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi11g0049 20 367 MYB Transcription Factor Family AT2G37630 68.219 8.02e-169 474
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Mibi11g0049 Myb_DNA-bind_6 2.6e-14 CL0123
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi11g0049 11 667490 669218 Mibi11g0049 11 667490 669218 ECH