Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi11g0046 ATGTTTACCAGAGACAGAGAGCATGATATGGCTGAATTGAAATCAGAGGAGTGTTGTCTAGAGAATAAGCAATCGACTGCTGCCTCTACCTCCTCTATCTCTGAAGGTAGTGCCAGTGTCAGTGCCACACACAAGTCCCCTGGAAGAAGTAGCCCAGCATCAGCATCATCCTCCCATCGGAGGACCACTGGCCCCATCAGGCGTGCAAAGGGTGGCTGGACATCCCAAGAGGATGAGACATTGAGAAATGCTGTTGCAACTTTTAAGGGCAAGAGTTGGAAGAGAATAGCTGAGTTTTTTCCTGATAGATCAGAAGTGCAATGTCTGCACAGATGGCAAAAGGTTCTTAATCCAGAACTTGTTAAAGGCCCTTGGACACCTGAGGAGGATGACAAAATTGTTGAACTGGTGTCAAAATATGGGCCAGCAAAATGGTCTATGATAGCAAAATCTTTGCCTGGTCGCATTGGGAAACAGTGTCGAGAGCGATGGCACAATCATCTTAATCCTGAAATAAAGAAGGATGCCTGGACTTTGGAGGAAGAACTGGCCCTCATGAATGCTCATCGCATACATGGGAACAAATGGGCTGAAATAGCTAAGGTTTTGCCAGGAAGGACTGATAATGCAATAAAGAACCACTGGAATAGTTCATTGAAGAAAAAATTAGAATTTTATTTAGCTACAGGAAATCTTCCGCCAGTCCAAAAGAACAGTGCACAAGGTGGTGTGAAAGATACAATAAGACGCTTGGCTAGTAAAACAGTACTTGCTTGCTCAAATAAAGTATTAGATATAGCTGCTGATACATCATCAGAAAATACAGACAATTCTAAGGATGGCAGTGGAAAGTATCAACTAGAGTCCTTGGCAACAGTGAGAGAGTTTGGTAATTCTCTGAGCCTTCCTGCAAATGAAGGTTCTGATTCTGACTTTGTAGAATGGAAGCCCATATCATCTAATCTAGATCTCGGCTACAGCAACTCAGAATCAGTGTCGAGGGATAATTTTGGATTGACCAGTGACCTAAAATTTGACAATGGTGGACTGAAAGACAAGCATACAGTTGGGAATTTTGTGAATAATGGTGAGATGAGCGGTAACAGGCTAATTGGTACATCATTTTCACAGGATAGTCCAGCCTCTGGTTCTTTGTGTTATGAGCCTCCATTGTTGGAGAGCTCAGTTCCTTTGGATTCCCTTTCTTTAAGTATGTATTCCCAGCAGAAAGAGTACAATGCTAGTCCAGTGATGTCACATGTTGGTTTCTTCACTCCTAGTGGGAAGGGTAGCGAATTATGCACAGAGACTCCTGAATCAATATTGAAAATGGCTGCTAAAACTTTCCCATACACTCCTTCCATATTGAGGAAGAGAAAGAATGGAGTCCAAGCACATGGAACTCCTTGCAAAGTTGTGAAAGTGGATGATGCATTTCATACTTCTAATGAACAGGAGAAAACCGAGTATAATGCTGGTTCTGGGCATGGAGAGCTCTGTGAGAGTCCGTCAACAGATGAGATTATCAATGATAAGGCTTTCAATGCTTCTCCCCCTTACCGGTTAAGATTCAAGCGAAAAGCACTTGTCAAGTCTGTGGAGAAACAACTGGAGTTTGCTTGTGATGAAGAGGAGCATGATGGCCACAAAATCGAAAAATCTTCTAGGAACACTGCAATGGCTGGAGATTGTATGCCTGAGACAAAAGTAGTAGTGACCTAG 1722 0.4292 MFTRDREHDMAELKSEECCLENKQSTAASTSSISEGSASVSATHKSPGRSSPASASSSHRRTTGPIRRAKGGWTSQEDETLRNAVATFKGKSWKRIAEFFPDRSEVQCLHRWQKVLNPELVKGPWTPEEDDKIVELVSKYGPAKWSMIAKSLPGRIGKQCRERWHNHLNPEIKKDAWTLEEELALMNAHRIHGNKWAEIAKVLPGRTDNAIKNHWNSSLKKKLEFYLATGNLPPVQKNSAQGGVKDTIRRLASKTVLACSNKVLDIAADTSSENTDNSKDGSGKYQLESLATVREFGNSLSLPANEGSDSDFVEWKPISSNLDLGYSNSESVSRDNFGLTSDLKFDNGGLKDKHTVGNFVNNGEMSGNRLIGTSFSQDSPASGSLCYEPPLLESSVPLDSLSLSMYSQQKEYNASPVMSHVGFFTPSGKGSELCTETPESILKMAAKTFPYTPSILRKRKNGVQAHGTPCKVVKVDDAFHTSNEQEKTEYNAGSGHGELCESPSTDEIINDKAFNASPPYRLRFKRKALVKSVEKQLEFACDEEEHDGHKIEKSSRNTAMAGDCMPETKVVVT 573
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi11g0046 573 PANTHER MYB PROTEIN-RELATED 70 155 - -
Mibi11g0046 573 Gene3D - 175 243 - -
Mibi11g0046 573 FunFam Transcriptional activator Myb isoform A 122 174 - -
Mibi11g0046 573 ProSiteProfiles Myb-like domain profile. 169 219 IPR001005 -
Mibi11g0046 573 FunFam Transcriptional activator Myb isoform A 69 121 - -
Mibi11g0046 573 ProSiteProfiles Myb-like domain profile. 117 168 IPR001005 -
Mibi11g0046 573 ProSiteProfiles Myb-like domain profile. 65 116 IPR001005 -
Mibi11g0046 573 FunFam Transcription factor MYB3R-2 175 238 - -
Mibi11g0046 573 Gene3D - 121 174 - -
Mibi11g0046 573 Gene3D - 69 120 - -
Mibi11g0046 573 SUPERFAMILY Homeodomain-like 119 215 IPR009057 -
Mibi11g0046 573 MobiDBLite consensus disorder prediction 1 19 - -
Mibi11g0046 573 CDD SANT 124 168 IPR001005 -
Mibi11g0046 573 MobiDBLite consensus disorder prediction 1 78 - -
Mibi11g0046 573 MobiDBLite consensus disorder prediction 20 62 - -
Mibi11g0046 573 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 173 223 IPR017930 -
Mibi11g0046 573 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 70 116 IPR017930 -
Mibi11g0046 573 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 117 172 IPR017930 -
Mibi11g0046 573 CDD SANT 176 219 IPR001005 -
Mibi11g0046 573 SUPERFAMILY Homeodomain-like 67 123 IPR009057 -
Mibi11g0046 573 SMART sant 69 118 IPR001005 -
Mibi11g0046 573 SMART sant 121 170 IPR001005 -
Mibi11g0046 573 SMART sant 173 221 IPR001005 -
Mibi11g0046 573 Pfam Myb-like DNA-binding domain 174 217 IPR001005 -
Mibi11g0046 573 Pfam Myb-like DNA-binding domain 70 116 IPR001005 -
Mibi11g0046 573 Pfam Myb-like DNA-binding domain 122 168 IPR001005 -
Mibi11g0046 573 CDD SANT 73 116 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi11g0046 Mibi-ChrMibi11 636848 642415 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi11g0046 60 555 MYB Transcription Factor Family AT5G02320 51.282 5.41e-141 416
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Mibi11g0046 Myb_DNA-binding 3.5e-13 CL0123