Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi11g0029 ATGGAACTAAATAAGCCGGAAATTTTGTCTGGCGCCAACCCTAGGAGGGCTCCAGGTGTGCTTACTCGATACTTGCACGCAGAATCAGCCAGTGTTGTTTTAGAAATGGGACAGGATGTACATAATAACATTGCAATACAGCCAGGGAAAGAATTTTCTGCAGAGCTTGATCTTGAAGCTGGTAGAAGAGAACCTGCTGCACCTGATTCACTCCTAAAGCATGAAGGTAGATCTGAATTTCAAGGGGAGAATGGCCAAGTGAGATATGCAGATCTCACTAATATTCTGGGATTGAAGAGAATGGACTCTGAGAATCATTTCAACATTGCTGATCTAAACTTCAGAAGAGAGCCAACTCAAGAGATAGACAATGGGGCTTTTGTTGATAAAAATAGCAAAAACCAAAAGGACGACAGTAATGTTACGCAAGGAGTGACGAAGACTCTTGGTGAATCAGTTGGTGCCCAAGCTGATACAGGAACACCTGGGTCTCCCTTTCTCGGAAAAGAATCCTCCTATTCCAATGAAGTTTCTGGTTTAGGAGTTGCGGATGATTCTCAATCTGGCAAAATAAAGTTACTTTGCAGCTTTGGTGGAAAAGTATTACCAAGGCCCAGTGATGGGAAACTCAGATATGTAGGTGGAGAGACTCGCATTATATCTATCCGAAAGGATATTTCATGGCAAGGGCTTGTTAAGAAGACCTTGGGTATTTGCAATCGACCTCACACAATTAAGTACCAGCTTCCAGGTGAGGATCTTGATTCCCTAATATCTGTCTCATCTGACGAGGATCTTCAAAATATGATTGAAGAATACCATGGGCCTGAAAAACACAATGAATCTCAAAGACTTCGAATTTTCTTAATTCCCTTGAGTGAATCTGAAAAGGAATTGTCATTTGAAGCAAAAACTGATCAGCAGAGTTATCCTGATTACCAATATGTTGCTGCCGTGAATGGCATAGGGGACTGTAGTCCTAGAATAAATAGTTCAGGGCAGAGCTTGGCAAATGAAGTTGGTCCATCAGGGAGAAGTTTGAATTTTGTTTCAGACTTTCAGCAAAATTTTCCAAATGAACCTTCTTCAGAGATCAAGGGTGGTGGTAATGCTATACATCCTAATGTATTTTTTAATGATTCTCAGAATCTGCAGAGGACCTCCCATCGACATCAACAGACTTCTGCTCCATTTCAAGTAGGAAATTTGAGCAGAATTTATACGCAGTCTCAAGGTAATAACTCATGCCAAGGAAGAAATGCAAGTATCTTTTCCTTAAATACTGCCCAACTATATCCGGAGACATCCAATGTAAGTGATGCTGATTGCAGATACTCCCAACAAATGGCTGCGACTTTCCTAAGTAACAATAACCCCTGCCAACAAGCTGATGTTGGTCTGCCAGAGCAGTATCATGGGGAGCTATTCAGAAATAGTCCTGGCAAGGAATTTATAACGGCTTCATATGCTGATCAACGTGATGGTTGTAATGATGAAATTTTGGGTGAAATGTCCATGCATCAATTAGGAAATCCTCTTTCCAACTTTTGTGAGTCAATTTGTCCACAGTCTGGATCCAATTGTATTCCTGATTCTCTAAATTGGTTACCTCATGCATTTTCTGATTCAAAGTTGTATGAAAGTGGACTAGAGTCTGGTTACTGCTCTCAAGAAGGGATTGGTCAATTCTCCTCGTTGAACCTTTCAATGGCTCAGTTATCTTCAATGGTACCCTCTAGTGTTCCACAAAGGGACCCTATGGAAATTCAGCATGATCCCCTTCTCATTTATCCACAAATACAAAGTAAGATACCAAATGTTGAGCCAGGTGAGTTGCACAGGAGGCAGGATTTCCCATTTTCTTCCCCATCTGCGGTATGTTTAGGGGTGAACGGTCCAATTCAGGAGGGTGGCATTTTATACAGTGAGAGAAATCCTTTAGCTCAAACTGATTTAACTGCATCCAGCTTTATAGAGCGGCAGTGTGGGGATAACACAGGGAACAGAGAAGTCATGAAGAGAACTGAAGACAGAAATTCTCTTCAGAGCAAGGATAGCAATCTTTATGAGAGGGAATCACCTGCAATTGCTGTAGAGAATGTGAATGAATTGCATCTTCTGGACTCTTCTCCAGCGTGTAATTTAAACATTAAGATTAATAAACAACATCAGTTAGAGCAACCTTCTGAGGGCAAGATTTCTGTATCCTCTTGCATGACAGGGATTTCCCAAAATAATCTGATTGAGAAGACCCCATTAGATGTCCTTCACATGAACCACAGGACTAGTGATGGAAGAGAATGCGGTTTAACTGAAAGTTTGAATGGTGAGCTAGGAGTTGATTTTTCTTTGACCAGAAAATCTGGGTTTGATGCTTTATCTCTAAAATGTGATGGAAACTTTTGTGGTAAAACTTCTTTTAGTAATTATTTGTTCGAGCTGTCCATGGACCCTGTTTCTCATAAACAAGCACAAGTTCAACCTTTTCAGAAGGATACAGATCTCCATGGAAATCCGACCATGAGCCCAGTGCTTTTGTATTCTTCAGTACTTCACGATGACCCCAGTTCAGGTTTACATTTTCCTGTGAATGAACTTCAGAACTCAAGCAACAATGTTGTGTTTGGAAGAGTATCTTCTCTCATTGATGATGACCTTGTAGCTAGTTCTAGTCGAATGGTTGATCAGTATAGTTGTGGCGCTCTTGCCTGTGAAACAAAAGTTCAAAATATCATGTCGGGGCAATCAAAAATTTTTGAAAACTGTGACAATTCAAACCAAGTTGAGCCACTCATTACTATTGAAGATGTAGCTGATGTTGTTCCTCCAAGCATTGAGTCTTCATCGGTGCCCAACCCGCATATAGCGGTTGAAATTGGAAATGATGTTTTATCCCCATCTGCAACAGAGTTGGAGAGCACTATTCCAGATTCTGAACCTGAGGATTTTAAAGATGATGAAGTGGACAATAATGGATCCCTTACTGATGCAATGATAGCAGAAATGGAAGCCAGCATCTACGGCTTGCAGATAATTCAAAATGCTGATCTCGAAGAACTTCGGGAGTTAGGATCTGGTACATATGGAACTGTTTATCATGGAAAATGGAGGGGTACGGATGTTGCAATAAAGAGAATTAAAAAGAGCTGCTTTTCAGGAAAATCTTCTGAGCAAGAACGATTGACAAAAGACTTCTGGAGAGAGGCACAAATCCTCTCAAATCTTCACCACCCCAATGTGGTTGCGTTTTATGGGGTCGTACCAGATGGAGCTGGAGGAACCTTGGCAACTGTAACAGAGTATATGGTTAACGGTTCCCTTAGACATGTCCTTGTTAAGAAGGATCGGTTACTTGATCATCGTAAAAGGCTAATAATTGCCATGGATGCAGCTTTTGGAATGGAATACTTGCATTCAAAAAATATCGTTCATTTTGATTTGAAATGTGATAATTTACTTGTCAATATGAGGGATCCACAACGACCCATATGTAAGGTCGGAGATTTTGGATTATCAAAAATTAAACGCAATACCCTGGTATCTGGAGGTGTGCGAGGAACCCTTCCTTGGATGGCACCAGAGCTGTTGAATGGCTGTAGCAACCGGGTTTCTGAGAAGGTTGATGTTTTCTCATATGGCATCTCTATGTGGGAGATATTGACTGGGGAGGAACCTTATGCAGATATGCATTGTGGCGCTATTATTGGGGGCATTGTGAAGAATACTCTTCGACCACCAATTCCACCACGTTGTGATCCTGAATGGAGGAAGCTTATGGAAGAATGTTGGTCACCTGACCCCGATAGACGGCCTTCTTTTACTGAGATAACTTGTCGTCTCCGATCAATGTCTATAGCCTTTCAAGCTAAGCCTCATAATCAGGTGCGGCAGGCAACATACATTGTTCATTCCTGA 3915 0.4133 MELNKPEILSGANPRRAPGVLTRYLHAESASVVLEMGQDVHNNIAIQPGKEFSAELDLEAGRREPAAPDSLLKHEGRSEFQGENGQVRYADLTNILGLKRMDSENHFNIADLNFRREPTQEIDNGAFVDKNSKNQKDDSNVTQGVTKTLGESVGAQADTGTPGSPFLGKESSYSNEVSGLGVADDSQSGKIKLLCSFGGKVLPRPSDGKLRYVGGETRIISIRKDISWQGLVKKTLGICNRPHTIKYQLPGEDLDSLISVSSDEDLQNMIEEYHGPEKHNESQRLRIFLIPLSESEKELSFEAKTDQQSYPDYQYVAAVNGIGDCSPRINSSGQSLANEVGPSGRSLNFVSDFQQNFPNEPSSEIKGGGNAIHPNVFFNDSQNLQRTSHRHQQTSAPFQVGNLSRIYTQSQGNNSCQGRNASIFSLNTAQLYPETSNVSDADCRYSQQMAATFLSNNNPCQQADVGLPEQYHGELFRNSPGKEFITASYADQRDGCNDEILGEMSMHQLGNPLSNFCESICPQSGSNCIPDSLNWLPHAFSDSKLYESGLESGYCSQEGIGQFSSLNLSMAQLSSMVPSSVPQRDPMEIQHDPLLIYPQIQSKIPNVEPGELHRRQDFPFSSPSAVCLGVNGPIQEGGILYSERNPLAQTDLTASSFIERQCGDNTGNREVMKRTEDRNSLQSKDSNLYERESPAIAVENVNELHLLDSSPACNLNIKINKQHQLEQPSEGKISVSSCMTGISQNNLIEKTPLDVLHMNHRTSDGRECGLTESLNGELGVDFSLTRKSGFDALSLKCDGNFCGKTSFSNYLFELSMDPVSHKQAQVQPFQKDTDLHGNPTMSPVLLYSSVLHDDPSSGLHFPVNELQNSSNNVVFGRVSSLIDDDLVASSSRMVDQYSCGALACETKVQNIMSGQSKIFENCDNSNQVEPLITIEDVADVVPPSIESSSVPNPHIAVEIGNDVLSPSATELESTIPDSEPEDFKDDEVDNNGSLTDAMIAEMEASIYGLQIIQNADLEELRELGSGTYGTVYHGKWRGTDVAIKRIKKSCFSGKSSEQERLTKDFWREAQILSNLHHPNVVAFYGVVPDGAGGTLATVTEYMVNGSLRHVLVKKDRLLDHRKRLIIAMDAAFGMEYLHSKNIVHFDLKCDNLLVNMRDPQRPICKVGDFGLSKIKRNTLVSGGVRGTLPWMAPELLNGCSNRVSEKVDVFSYGISMWEILTGEEPYADMHCGAIIGGIVKNTLRPPIPPRCDPEWRKLMEECWSPDPDRRPSFTEITCRLRSMSIAFQAKPHNQVRQATYIVHS 1304
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi11g0029 1304 Gene3D Transferase(Phosphotransferase) domain 1 1105 1302 - -
Mibi11g0029 1304 Gene3D - 209 291 - -
Mibi11g0029 1304 SUPERFAMILY CAD & PB1 domains 206 292 - -
Mibi11g0029 1304 FunFam Octicosapeptide/phox/Bem1p domain kinase superfamily protein 1105 1296 - -
Mibi11g0029 1304 Gene3D Phosphorylase Kinase; domain 1 1010 1104 - -
Mibi11g0029 1304 SUPERFAMILY Protein kinase-like (PK-like) 1005 1277 IPR011009 -
Mibi11g0029 1304 Pfam PB1 domain 207 289 IPR000270 GO:0005515
Mibi11g0029 1304 FunFam Octicosapeptide/phox/Bem1p domain kinase superfamily protein 1010 1104 - -
Mibi11g0029 1304 SMART PB1_new 205 292 IPR000270 GO:0005515
Mibi11g0029 1304 ProSitePatterns Protein kinases ATP-binding region signature. 1023 1048 IPR017441 GO:0005524
Mibi11g0029 1304 ProSiteProfiles Protein kinase domain profile. 1017 1287 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi11g0029 1304 PRINTS Tyrosine kinase catalytic domain signature 1099 1112 IPR001245 GO:0004672|GO:0006468
Mibi11g0029 1304 PRINTS Tyrosine kinase catalytic domain signature 1207 1229 IPR001245 GO:0004672|GO:0006468
Mibi11g0029 1304 PRINTS Tyrosine kinase catalytic domain signature 1136 1154 IPR001245 GO:0004672|GO:0006468
Mibi11g0029 1304 PRINTS Tyrosine kinase catalytic domain signature 1251 1273 IPR001245 GO:0004672|GO:0006468
Mibi11g0029 1304 FunFam Octicosapeptide/phox/Bem1p domain kinase superfamily protein 210 292 - -
Mibi11g0029 1304 MobiDBLite consensus disorder prediction 149 169 - -
Mibi11g0029 1304 CDD STKc_MAP3K-like 1023 1280 - -
Mibi11g0029 1304 CDD PB1_UP2 194 290 - -
Mibi11g0029 1304 Pfam Protein tyrosine and serine/threonine kinase 1018 1279 IPR001245 GO:0004672|GO:0006468
Mibi11g0029 1304 ProSitePatterns Serine/Threonine protein kinases active-site signature. 1142 1154 IPR008271 GO:0004672|GO:0006468
Mibi11g0029 1304 SMART serkin_6 1017 1286 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi11g0029 1304 PANTHER SERINE-THREONINE PROTEIN KINASE 242 1281 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi11g0029 Mibi-ChrMibi11 361714 369144 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi11g0029 188 332 MAP Kinase Kinase Kinase AT1G16270 58.621 3.61e-41 163
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-6 Mibi11g0029 PK_Tyr_Ser-Thr 5.8e-63 CL0016