Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Mibi11g0005 | ATGAGTTGTTTTCCTTGTTTTTCTTGCAACGAGAAGAGAGCAGCACAGAGGAAGCCCAGACAAGGAGTAAGGGCACAAACTCAACCATGTCAACCTCAAAGGCAAGCCCTACTTACTCAGGCCCGCCCTGAGAATAAATACTATCCAAAGGCAAGTGAGGGAAGGCTAAAGAATAACAGTAATGCAAAGAACAATAACATTGCCGCGGAAACTTTCACGTTTCGAGAATTGGCGGCCGCCACAAGGAACTTTCGGGGAGAATGCCTCATTGGCGAAGGAGGTTTTGGAAGAGTGTACAAGGGAAAACTGGAAAAAACGAACCAGATTGTGGCGGTGAAGCAGCTGGACAGGAATGGAGTGCAAGGGAATAGAGAGTTCCTTGTGGAAGTGCTGATGTTAAGCCTCTTACATCACGAAAATCTGGTGAATCTGATCGGATACTGTGCGGATGGAGATCAAAGGCTGTTGGTGTATGAGTACATGCCTTTGGGATCCTTGGAGGACCATCTTCTTGACCTGGAAGAGGAGGAGAGGGCATTAGAGTGGGGTGTGAGGATGAAAATAGCATTGGGGGCATCGAAAGGGCTGGAATATTTGCACGATAAGGCAAACCCTCCGGTGATATACCGAGACTTGAAGGCCTCCAACATACTGCTGGGGGAGGGGTTTCACGCGAAGCTGTCGGATTTCGGGCTGGCCAAGCTGGGGCCCACAGGAGACAAGTCGCACGTCTCCTCCCGAATCATGGGAACCTACGGTTACTGCGCTCCCGAGTATCAACGAACCGGCCAGCTCACCCTCAAATCTGACGTCTACAGTTACGGCGTCGTTTTGTTGGAACTCATCACTGGAAAGCGAGTTATCGACAACACCAGGCCCACCCGCCAGCAAAATCTGGTCTCATGGGCACGACACATCTTCAAGGATCAAAAGAGATACGAAGAGCTGGCGGATCCCCTGCTTGGAAGAAAATACCCAGTGAGAGGGTTGAAGCAGGCCGTGGCAGTGGCCGCCATGTGCCTCCACGAGGAACCCACCGCCCGACCCTACATCAGAGACGTCGTCACCGCCCTCACTTTCCTCGCCACCGACGACCCCTCCCCTCCTCCTCCTCCGCCGCCGCCCCCACCCATCCTTCTTCACCGTGACGCCGTTGCCCAACGTCAACTCGCCCTTGCTGAAGCCATCAAGTGGGGTTCTGCTTCTAGGAATAATCCTCCCTTACGAATACACACACCCACCACTTAA | 1248 | 0.5288 | MSCFPCFSCNEKRAAQRKPRQGVRAQTQPCQPQRQALLTQARPENKYYPKASEGRLKNNSNAKNNNIAAETFTFRELAAATRNFRGECLIGEGGFGRVYKGKLEKTNQIVAVKQLDRNGVQGNREFLVEVLMLSLLHHENLVNLIGYCADGDQRLLVYEYMPLGSLEDHLLDLEEEERALEWGVRMKIALGASKGLEYLHDKANPPVIYRDLKASNILLGEGFHAKLSDFGLAKLGPTGDKSHVSSRIMGTYGYCAPEYQRTGQLTLKSDVYSYGVVLLELITGKRVIDNTRPTRQQNLVSWARHIFKDQKRYEELADPLLGRKYPVRGLKQAVAVAAMCLHEEPTARPYIRDVVTALTFLATDDPSPPPPPPPPPPILLHRDAVAQRQLALAEAIKWGSASRNNPPLRIHTPTT | 415 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Mibi11g0005 | 415 | Gene3D | Phosphorylase Kinase; domain 1 | 55 | 160 | - | - | |
| Mibi11g0005 | 415 | Gene3D | Transferase(Phosphotransferase) domain 1 | 161 | 366 | - | - | |
| Mibi11g0005 | 415 | SMART | serkin_6 | 84 | 361 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
| Mibi11g0005 | 415 | PANTHER | OS07G0668900 PROTEIN | 6 | 366 | - | - | |
| Mibi11g0005 | 415 | SUPERFAMILY | Protein kinase-like (PK-like) | 69 | 386 | IPR011009 | - | |
| Mibi11g0005 | 415 | FunFam | Serine/threonine-protein kinase PBS1 | 161 | 370 | - | - | |
| Mibi11g0005 | 415 | CDD | STKc_IRAK | 90 | 359 | - | - | |
| Mibi11g0005 | 415 | Pfam | Protein kinase domain | 89 | 355 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
| Mibi11g0005 | 415 | ProSitePatterns | Protein kinases ATP-binding region signature. | 90 | 113 | IPR017441 | GO:0005524 | |
| Mibi11g0005 | 415 | ProSiteProfiles | Protein kinase domain profile. | 84 | 361 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
| Mibi11g0005 | 415 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 207 | 219 | IPR008271 | GO:0004672|GO:0006468 | |
| Mibi11g0005 | 415 | FunFam | Serine/threonine-protein kinase PBS1 | 56 | 160 | - | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Mibi11g0005 | Mibi-ChrMibi11 | 65962 | 67711 | Dispersed/Wgd |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Mibi11g0005 | 1 | 403 | Glycoside Hydrolase | AT3G07070 | 65.049 | 0.0 | 516 |
Transcription factors information