Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi10g2030 ATGGTGGTGATCATGCAGCAGCAGCAGGTGCCACAGCTCAACAACAATCCTCAGTCCTCCTCTTCCTCCCTTAGGTCGCCGCCTTCTGCAACACCCCTACCCCTCTCTCAGTTACCTTCACTGCCTCCCGATCATGTGATTGGACCACCGGTGCTGCCCATCGCTTCCGCTGCCTGCCCCTTGCCTAGAGTCCGACTTTCCGATATTGCCCTTTATGACGGAGCTCCCGCTGCGTCCTACCTCAGAGCAGTGGAAGCACTGTCCGGCTCTTTGATGAGGCATAATGCCGCCTTGATCGAATTGGGCTGCCACGATACCTCTCTCATGAGGTGCGGATTGGAAGCTTCCAGATTGTTCTTTCGGAGCACCGCCCATCTCGGTGCTGGTACCCGAGGTGGGGTTCACATGTACAGGGCAGGAAGGGCTTTGGAAGACTGGGATTCATCTCCCCCATGTATGGCTGATATTTTTAGGTGCATGGGAAAGGCGGCTCGAACTACTTTGTGTGCCATCGCAAGGCATCTTCGTCTTCGAAGCGATGTTTTTAACCATTTGCTTGATGATACCCCGTTGCCTGCTAATGAGGTGTCCTCATCAGTTCTTGTTGCAACCTACTCACACACTTCTTTGCCAAATGGAAAAGGTGCTATGGGAGGTGGTAAGCCAAACATGAATGGGGAAATCGAGAAGGGTTTGTTGACATTGATATCTTCAGACGCTCCTGGTCTTCAGGTCTGTGACCCCAATGGCCGCTGGTATCTGGCAGATAGTGGGTGTGGTCCTGGGGATCTTTTGTTGCTCACAGGCAAGGCACTTAGCCAAGCCACTGCAGGGCTTCGTCCTGCGACATCATATAGAGCTTCACCTGATCATTTTCTAGGTGCTAACAGTGGAGGAAGAACATCTCTTGCATTTAGACTCATGCCACAGGGCAATGCTATATTGGACTGTTCTCCAATTGCAGCAGCTGGACATATTATTCCCCAAAGTTATGTTCCAATATCTGTAAGCCAGTTTATGGATGACCTTTCTGCTGAAGAAGTGATAGGCAGCCGATCTTATCATACTTACGTTGCTGGAAACAATGTGAATAAGGAACAATCATTGAGAAGTGTTCTGTCAGATCCTTTGTCTGGAGCATTCCTTGAAGACGCCATGCTTGTCTCGTGTGGGCATTCATTTGGTGGTCTCATGCTAAGGAGAGTCATTGAAACTTCAAGATGTACTCTCTGCAATATAAATATTGAGACCAGTTCTCTGATCCCCAACTTTGCTCTAAGAGCAGCAGCCTCAGCAGTCAAACATGAGGATGATCGAAGGTTATTTCATAATGCTGTTCTTCGAAAGCGCCGGAAAGAAATGGGTGATCAAATTGATTCACTGAGAAGAACAAACAGGGAAAATGGAGATGTTATTGGTGATGGTGGACCCCACCGGGGAGTGCAGTATCCTTTTTCAGTAAATGAGAAGGTGATAATTAAGGGTAATAGGAGGACACCAGAAAAATTCGTTGGCAAAGAAGCTGTCATTACATCTCAGTGTCTTAATGGCTGGTACTTGCTTAAGATTATTGGTACTGGGGAGAATGTGCGCTTGCAATACCGTTCTCTGAGGAAACTATCAAACTCACAAGCTATAGAGGACCAGTCGCAGCCAATTCGAAATAGCAGCTCATAA 1677 0.4806 MVVIMQQQQVPQLNNNPQSSSSSLRSPPSATPLPLSQLPSLPPDHVIGPPVLPIASAACPLPRVRLSDIALYDGAPAASYLRAVEALSGSLMRHNAALIELGCHDTSLMRCGLEASRLFFRSTAHLGAGTRGGVHMYRAGRALEDWDSSPPCMADIFRCMGKAARTTLCAIARHLRLRSDVFNHLLDDTPLPANEVSSSVLVATYSHTSLPNGKGAMGGGKPNMNGEIEKGLLTLISSDAPGLQVCDPNGRWYLADSGCGPGDLLLLTGKALSQATAGLRPATSYRASPDHFLGANSGGRTSLAFRLMPQGNAILDCSPIAAAGHIIPQSYVPISVSQFMDDLSAEEVIGSRSYHTYVAGNNVNKEQSLRSVLSDPLSGAFLEDAMLVSCGHSFGGLMLRRVIETSRCTLCNINIETSSLIPNFALRAAASAVKHEDDRRLFHNAVLRKRRKEMGDQIDSLRRTNRENGDVIGDGGPHRGVQYPFSVNEKVIIKGNRRTPEKFVGKEAVITSQCLNGWYLLKIIGTGENVRLQYRSLRKLSNSQAIEDQSQPIRNSSS 558
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi10g2030 558 Gene3D - 134 349 IPR027443 -
Mibi10g2030 558 MobiDBLite consensus disorder prediction 1 40 - -
Mibi10g2030 558 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 367 437 IPR013083 -
Mibi10g2030 558 Coils Coil 444 464 - -
Mibi10g2030 558 SUPERFAMILY RING/U-box 369 436 - -
Mibi10g2030 558 SUPERFAMILY Clavaminate synthase-like 33 319 - -
Mibi10g2030 558 PANTHER U-BOX DOMAIN-CONTAINING PROTEIN 62-RELATED 59 555 - -
Mibi10g2030 558 MobiDBLite consensus disorder prediction 1 31 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi10g2030 Mibi-ChrMibi10 43475457 43482957 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi10g2030 369 539 Plant U-box Gene Family AT5G05230 41.618 2.87e-38 142