Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi10g2029 ATGAGTACTCGAGCGCTCCGGGGTGCTTCTGTAAGAAGTTACCGGCGGAGAAAAACTGCTCTGGACTTGGACCTTAACCGGGCCCCACCTAGTGAAAGTCGGGAGCTGGAAGGACCTTCAACTCAGCTGAGGCCTCAAGGAGTTCAAGCTAGTCTTCAATCCCAACCTGCCATGATTGATGTTGAGGCCATTGATGATGATGTTGTTGAATCTACTCCGCGGGCCTTTGCTGAGGCTAAAAACAATTCAAGGAGAAACAGACGCAGGGCTGTAGTTGATGTGGATTTAGAAGATCGGACTAGAGTAACTAATAATAATTGCAACAAACGCAGAAGAGATTCTCCAAGCCAAACCATTATTAACTGTGATCTTTATATAAACTTGGAAGGCAGTAGCGGTTCTATGAATGATAACGCAAGGAAGTCTCCTGAACCCCTCAAAGAGCCTGTTTTCAATTGCCCAATATGTATGGGCCCTTTGGTAGAAGAAATGTCGACAAGGTGTGGTCATATTTTTTGCAAGAGTTGCATTAAGGCTGCAATAAATGCACAGGGTAAATGCCCTACCTGTAGGAAAAAGGTTACTGCAAAAGAGCTCATAAGGGTTTTTCTCCCATCAACTAGTTGA 627 0.4482 MSTRALRGASVRSYRRRKTALDLDLNRAPPSESRELEGPSTQLRPQGVQASLQSQPAMIDVEAIDDDVVESTPRAFAEAKNNSRRNRRRAVVDVDLEDRTRVTNNNCNKRRRDSPSQTIINCDLYINLEGSSGSMNDNARKSPEPLKEPVFNCPICMGPLVEEMSTRCGHIFCKSCIKAAINAQGKCPTCRKKVTAKELIRVFLPSTS 208
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi10g2029 208 ProSiteProfiles Zinc finger RING-type profile. 153 191 IPR001841 -
Mibi10g2029 208 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 125 206 IPR013083 -
Mibi10g2029 208 PANTHER ELFLESS, ISOFORM B 4 208 - -
Mibi10g2029 208 ProSitePatterns Zinc finger RING-type signature. 168 177 IPR017907 -
Mibi10g2029 208 SUPERFAMILY RING/U-box 148 203 - -
Mibi10g2029 208 SMART ring_2 153 190 IPR001841 -
Mibi10g2029 208 Pfam Zinc finger, C3HC4 type (RING finger) 152 190 - -
Mibi10g2029 208 MobiDBLite consensus disorder prediction 24 46 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi10g2029 Mibi-ChrMibi10 43468475 43471513 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi10g2029 12 207 C3H Transcription Factor Family AT5G48655 52.764 1.06e-54 171