Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi10g2026 ATGTCACGTCAGACTCCCACCTCCGCCTTTATCAAATCCAAGACCCTCGACAATAAATATGGCAGACAGTTGTGTCAGTACTCAAAGGTGAAAGAGGATATTGCCTGTTTTGGGAGTGGCAGTTCAGAGATGCTTGGAGATGAGATAGGGAAAGGAGCATACGGTCGAGTTTACAAAGGTTTGGACCTAGAAAATGGAGACTTCGTTGCAATTAAGCAAGTTTCTTTGGAGAATATTGCTCAGGAGGATCTCAACATCATCATGCAAGAGATCGATTTATTAAAGAATTTGAATCATAAGAACATTGTTAAATATCTTGGATCCTTAAAGACAAAGAGTCACCTTCACATTATTCTTGAGTATGTGGAAAATGGTTCACTTGCTAATATTATCAAGCCAAATAAATTTGGACCCTTTCCAGAATCATTAGTTGCTGTTTATATTGCTCAGGGCCTTGTCAAACTTGCTGATTTTGGTGTTGCGACAAAGTTGACTGAGGCTGATGTTAATACTCATTCAGTTGTTGGAACTCCATATTGGATGGCTCCAGAGGTTATAGAAATGTCTGGGGTTTGTGCTGCTTCGGACATTTGGAGTGTTGGCTGTACAGTTATTGAACTTCTTACATGTGTGCCTCCGTATTATGATCTACAGCCTATGCCAGCTCTCTTTCGTATTGTTCAGGATGAGCATCCTCCAATTCCTGATGGTCTGTCTCCTGATATCACCGATTTTCTGCGTCAATGCTTTAAGAAGGTAGGTGGTTTTTATCTTATTGGTTTCTTGGTGTTTCTTTATGCGTGTACTGATGCTAGACAAAGACCTGATGCTAAGTCACTGCTATCTCACCCGTGGATACAAAATTGTAGGCGTGCGTTGCAGTCATCTCTTCGACACAGTGGAACGTTAAGAAATATAGAGGAAGATGATTCCTCTGATGTAGCAGCTTCTGGTGATGGTCAGAAGAGTGCTGGTGAAGGTTCATCTGTGGGTAATGTGAACCCATTGAAAGAGTTGTCAATTGGGGTTGCCGGTGGCAGCAAACATCACGAGGAAGTAGGTTCGGATTCTGATTTTCTGAATGAGAAAATAGAGAAGCAGGATGATGTGTTTTCAGATCAAGTTCTCACTTTAGCTATTCATGAGAAGTTGTCTCTACAAACTGGATCTACTAAGCCCTGTTCTAGTGGAGAAGTTGCTATCACTGAGATGAGTTCAGATCATGACATTCCCAATACTAAAGACCATAGTGAAGTCATGGTGCATGGAGAAGTTGGATCTCCAGAATCAAGAGGCATAGATAGGAAGACTGGGGGAAAAGCTAGTTCTGTCACCAGTGGCAGTATATCGTTCTGTTTTGGACCAAGAGGTCAAGACAATGGTTCCCTAAAGGCCATGAAGATGCTTCCCTCTTTGGAAGGGAATGAGCTGAGCAGATTTAGTGATCCTCCTGGAGATGCCTCTTTAGATGATTTATTTCATCCATTAGATAAACACGCTAGGGACTCTGCTGCTGAGGCATCCACATCTGCATCCACATCACACATGGCTAATGATATTGCAGCTATGAATAATGGTGGAAAGCAAACCATTGATCGGAAGCAGTGGGAGAAGGAGATGGACAATGGGAAGGATAATAGTGGTGGGAATCTTTTACGCTTAATGATGGGAGTCATAAAAGATGATGTAATTGATATAGATGGTCTGGTTTTTGATGAAAAATTGCCTGGAGATAACCTGTTCCCTTTGCAGGCTGTTGAGTTCAGCAAATTAGTTGGGTCATTGCGACCAGAGGAATCCGAAGACGTGATTGTCACTGCATGTCAGAGACTTATTGCTATCTTTCACCAACGTCCAGAGCAGAAGATTGTCATATGTTCTGTACTCCAGCTTATAAATCAAATCATTAAGGACAATATTGATTTTCAAGAAAATGCATGTCTTGTTGGACTGGTAAGTGCTGTGCATATTCCCATGGTGATGAGTTTTGCTGTACCTGATCGTCCACGAGAAATTCGCATGGAAGCAGCTTTTTTTTTGCAGCAGCTTTGTCAGTCAAGCTCTTTGACATTGCAAATGTTTATAGCTTGTCGTGGAATCCCAGTTTTAGTAGGATTTCTGGAGGCTGATTATGCAAAGTACAGGGAAATGGTACATCTGGCTATTGATGGCATGTGGCAAGTCTTTAAGCTTCAGCGATCAACCCCTAGAAATGACTTTTGTCGAATAGCTGCAAAGAATGGAATACTCCTGAGGCTTATAAACACCCTCTATAGCTTAAATGAGGCAACACGGCTAGCTTCTATATCTGTTGGGGTTGGATTTCCAGTTGATGGTTTGACTCAACGTCCACGATCTGGTCCCTTGGATTCAACACATCCTATTGGCATTCAGAATGATGTGCTGCTGTCTTCAGCAGACCAGTTGGATCTCCCTAAAGTGAGGCATGGGATATCTGATCATCACTTGGAACCTTTACATGCATCAACCTCACATCCTCAAAGATCAGATGGTAATTACTCTGTAGACATTGATAGGCTTCAATCTAGCAATGCAATGGCTGAATTTACATCAGAAAAGAGTACAAATGTAGCATCCAGGGAATCTTCAAAGGAGAGGGACTATGTGGATCGATGGAAAACTGATTCCTCTCGAGCAGATGTTGAACTTAGACAGCAGCGTATCAGTAATTCTGCTAGCAGGGCATCAACAGATAGGGCTTTGAAATTGACAGAACCTGCATCGAATGGATTATCACTGGCAGGAGCTACACAGCAAGAGCAAGTTAGGCCTCTTCTTAGCTTGTTAGAGAAAGAGCCTCCATCTAGACAAATATCTGGTCAGCTTGAATACGTGCGCCAGTTGTCAGGATTAGAAAGGCATGAAAGTGTACTCCCTTTACTGCATGCCTCTGAGAAGAAGACAAATGGTGAGCTGGACTTCTTGATGGCAGAATTTGCAGATGTTTCCCAACGTGGAAGAGAAAATGGAAATCTTGACACTGCTGCTAGAGTGTCTTACAAAGCTGCTTTGAAGAAACCAGGGGCTTTGGGGTCTAATGAAGGGGCTGCTTCCACATCTGGTATTGTATCTCAGACAACTTCGGGTGTTCTGTCTGGTTCAGGTGTCTTAAATGCCAGGCCAGGCAGTGCTACTTCATCTGGGCTCCTTTCCCACATGGTTTCATCGTTGAATGCTGATGTTGCCAGGGAGTACCTAGAGAAAGTAGCAGATCTTTTGCTTGAGTTTGCTCAAGCTGACACGACAATACTGAAGTGTATTAATCATCTGTCGACTGATCCTAACTGCTTAGAGAATCTCCAACGAGCTGAAGCAATAAAATACTTGATACCAAATTTGCAACTCAAAGAGGGGCCTCTAATATCACAGATACATCATGAGGTCAGTTTTGCTGACCAATTTACTATTGTTATTATCTGTGAATCAGAAGAATAA 3456 0.4242 MSRQTPTSAFIKSKTLDNKYGRQLCQYSKVKEDIACFGSGSSEMLGDEIGKGAYGRVYKGLDLENGDFVAIKQVSLENIAQEDLNIIMQEIDLLKNLNHKNIVKYLGSLKTKSHLHIILEYVENGSLANIIKPNKFGPFPESLVAVYIAQGLVKLADFGVATKLTEADVNTHSVVGTPYWMAPEVIEMSGVCAASDIWSVGCTVIELLTCVPPYYDLQPMPALFRIVQDEHPPIPDGLSPDITDFLRQCFKKVGGFYLIGFLVFLYACTDARQRPDAKSLLSHPWIQNCRRALQSSLRHSGTLRNIEEDDSSDVAASGDGQKSAGEGSSVGNVNPLKELSIGVAGGSKHHEEVGSDSDFLNEKIEKQDDVFSDQVLTLAIHEKLSLQTGSTKPCSSGEVAITEMSSDHDIPNTKDHSEVMVHGEVGSPESRGIDRKTGGKASSVTSGSISFCFGPRGQDNGSLKAMKMLPSLEGNELSRFSDPPGDASLDDLFHPLDKHARDSAAEASTSASTSHMANDIAAMNNGGKQTIDRKQWEKEMDNGKDNSGGNLLRLMMGVIKDDVIDIDGLVFDEKLPGDNLFPLQAVEFSKLVGSLRPEESEDVIVTACQRLIAIFHQRPEQKIVICSVLQLINQIIKDNIDFQENACLVGLVSAVHIPMVMSFAVPDRPREIRMEAAFFLQQLCQSSSLTLQMFIACRGIPVLVGFLEADYAKYREMVHLAIDGMWQVFKLQRSTPRNDFCRIAAKNGILLRLINTLYSLNEATRLASISVGVGFPVDGLTQRPRSGPLDSTHPIGIQNDVLLSSADQLDLPKVRHGISDHHLEPLHASTSHPQRSDGNYSVDIDRLQSSNAMAEFTSEKSTNVASRESSKERDYVDRWKTDSSRADVELRQQRISNSASRASTDRALKLTEPASNGLSLAGATQQEQVRPLLSLLEKEPPSRQISGQLEYVRQLSGLERHESVLPLLHASEKKTNGELDFLMAEFADVSQRGRENGNLDTAARVSYKAALKKPGALGSNEGAASTSGIVSQTTSGVLSGSGVLNARPGSATSSGLLSHMVSSLNADVAREYLEKVADLLLEFAQADTTILKCINHLSTDPNCLENLQRAEAIKYLIPNLQLKEGPLISQIHHEVSFADQFTIVIICESEE 1151
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi10g2026 1151 MobiDBLite consensus disorder prediction 304 334 - -
Mibi10g2026 1151 MobiDBLite consensus disorder prediction 854 876 - -
Mibi10g2026 1151 ProSitePatterns Protein kinases ATP-binding region signature. 49 72 IPR017441 GO:0005524
Mibi10g2026 1151 SUPERFAMILY ARM repeat 589 768 IPR016024 -
Mibi10g2026 1151 PANTHER MITOGEN-ACTIVATED KINASE KINASE KINASE 150 716 - -
Mibi10g2026 1151 ProSiteProfiles Protein kinase domain profile. 43 286 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi10g2026 1151 MobiDBLite consensus disorder prediction 316 334 - -
Mibi10g2026 1151 MobiDBLite consensus disorder prediction 425 444 - -
Mibi10g2026 1151 Gene3D Transferase(Phosphotransferase) domain 1 151 321 - -
Mibi10g2026 1151 Gene3D Transferase(Phosphotransferase) domain 1 44 150 - -
Mibi10g2026 1151 SUPERFAMILY Protein kinase-like (PK-like) 45 299 IPR011009 -
Mibi10g2026 1151 Gene3D - 585 771 IPR011989 -
Mibi10g2026 1151 Pfam Protein kinase domain 47 150 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi10g2026 1151 CDD STKc_Cdc7_like 44 286 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi10g2026 Mibi-ChrMibi10 43428644 43448186 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi10g2026 1 1135 MAP Kinase Kinase Kinase AT3G13530 60.293 0.0 1315
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE-Pl Mibi10g2026 Pkinase 3e-22 CL0016